DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and Odf1

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_017450148.1 Gene:Odf1 / 24610 RGDID:3228 Length:256 Species:Rattus norvegicus


Alignment Length:75 Identity:21/75 - (28%)
Similarity:37/75 - (49%) Gaps:7/75 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFS-----RRYQLPSDVNPDTVTSSLS 142
            ::|..|.|.::.|:|.|..|.|..:.|.:.|..|  |:::|     :.:.||..|:...||.|..
  Rat   126 VNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLG--SKKYSYMNICKEFSLPPCVDEKDVTYSYG 188

  Fly   143 SDGLLTIKAP 152
            ....:.|::|
  Rat   189 LGSCVKIESP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 21/75 (28%)
Odf1XP_017450148.1 ACD_HspB10 113..199 CDD:107237 21/75 (28%)

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