DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and Odf1

DIOPT Version :9

Sequence 1:NP_001261156.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_032783.2 Gene:Odf1 / 18285 MGIID:97424 Length:248 Species:Mus musculus


Alignment Length:75 Identity:21/75 - (28%)
Similarity:37/75 - (49%) Gaps:7/75 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 LDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFS-----RRYQLPSDVNPDTVTSSLS 142
            ::|..|.|.::.|:|.|..|.|..:.|.:.|..|  |:::|     :.:.||..|:...||.|..
Mouse   115 VNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLG--SKKYSYMNICKEFSLPPCVDEKDVTYSYG 177

  Fly   143 SDGLLTIKAP 152
            ....:.|::|
Mouse   178 LGSCVKIESP 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_001261156.1 metazoan_ACD 71..153 CDD:107247 21/75 (28%)
Odf1NP_032783.2 2 X 5 AA repeats of [RC]-C-L-C-D 34..78
ACD_HspB10 102..188 CDD:107237 21/75 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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