DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)efl and Hspb2

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:NP_569115.1 Gene:Hspb2 / 161476 RGDID:70914 Length:182 Species:Rattus norvegicus


Alignment Length:167 Identity:57/167 - (34%)
Similarity:91/167 - (54%) Gaps:22/167 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SRLLDQHFGQGLKRDDLMSSVWNSRPTVLRSGYLRPWHTNSLQKQESG-STLNIDSEKFEVILDV 85
            |||.:|.||:||..:::::      ||:....|:||....:.:...:| |.|.:...||:..|||
  Rat    22 SRLGEQRFGEGLLPEEILT------PTLYHGYYVRPRAARAGEGGRAGASELRLSEGKFQAFLDV 80

  Fly    86 QQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRYQLPSDVNPDTVTSSLSSDGLLTIK 150
            ..|:|.|:||:..|..:.|..:|.::.|.||:|||:|.|.|.||:||:|..|.::||.||:|.::
  Rat    81 SHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLE 145

  Fly   151 AP--------------MKALP-PPQTERLVQITQTGP 172
            ||              :..|| ||..|...::.:..|
  Rat   146 APRGGRHLDTEVNEVYISLLPAPPDPEEEEEVARVEP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 36/95 (38%)
Hspb2NP_569115.1 Crystallin <21..55 CDD:425732 13/38 (34%)
alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a similar domain found in p23 (a cochaperone for Hsp90) and in other p23-like proteins. 67..148 CDD:469641 35/80 (44%)

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