DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)efl and l(2)efl

DIOPT Version :10

Sequence 1:NP_523827.1 Gene:l(2)efl / 37744 FlyBaseID:FBgn0011296 Length:187 Species:Drosophila melanogaster
Sequence 2:XP_001688031.1 Gene:l(2)efl / 1269952 VectorBaseID:AGAMI1_010316 Length:192 Species:Anopheles gambiae


Alignment Length:180 Identity:110/180 - (61%)
Similarity:140/180 - (77%) Gaps:4/180 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVVPLMFRDWWDELDFPMRTSRLLDQHFGQGLKRDDLMSS----VWNSRPTVLRSGYLRPWHTN 61
            |||||::|||||::.|.|:|:|||||||||.||:.|||.||    ...|.|::||.||.|||...
Mosquito     1 MSVVPMLFRDWWEDFDTPLRSSRLLDQHFGTGLRADDLFSSFPARAPLSSPSLLRGGYYRPWRNT 65

  Fly    62 SLQKQESGSTLNIDSEKFEVILDVQQFSPSEITVKVADKFVIVEGKHEEKQDEHGYVSRQFSRRY 126
            :|.:|:||||||:|.::|::|||||||:|.|||||..|:.|:|||||||||||||||||.|:|||
Mosquito    66 ALTRQDSGSTLNLDKDRFQIILDVQQFTPEEITVKTTDRCVVVEGKHEEKQDEHGYVSRHFTRRY 130

  Fly   127 QLPSDVNPDTVTSSLSSDGLLTIKAPMKALPPPQTERLVQITQTGPSSKE 176
            .||:..:|:.|.|:|||||:||:.||.|:||.|..||.|.|.|||..:|:
Mosquito   131 MLPNGHDPNDVVSTLSSDGVLTVTAPKKSLPAPNPERSVPIQQTGQPAKD 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)eflNP_523827.1 metazoan_ACD 71..153 CDD:107247 54/81 (67%)
l(2)eflXP_001688031.1 Crystallin <22..60 CDD:425732 25/41 (61%)
metazoan_ACD 79..157 CDD:107247 52/77 (68%)

Return to query results.
Submit another query.