DRSC/TRiP Functional Genomics Resources

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Protein Alignment: pita and CG31388

Sequence 1:NP_611806.3 Gene:pita FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_650060.1 Gene:CG31388 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster

Alignment Length:515 Identity:108/516 (21%)
Similarity:196/516 (38%) Gaps:110/516 (21%)


  Fly    17 VCRFC--LTEQKLA-SIFEENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFEHCYR 78
            :||.|  :.:..:| ::|:     .:::::..||..:|.:::.....:|..:|.:|:...:....
  Fly     4 ICRTCSRMADPAVAKNLFD-----PSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAID 63

  Fly    79 FKQMCKRAETL----LRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPKKLLNTM 139
            |:::|..|:.|    |||          :||.......:|.:.|          .:.|.:|.|. 
  Fly    64 FRRVCIEAQELLELQLRQ----------VEKEEEAFESLAEQWL----------DDCPDELSNL- 107

  Fly   140 AKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVD-NNQELSMDDVQSMLEDMASEL 203
                                        |||.:.:...:...| ..|:.:.|::.|:.....:|.
  Fly   108 ----------------------------SPVLQLNDRMDFIFDPEPQDKNTDELASIKTTTTTEY 144

  Fly   204 EKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAIVTEVLDSDLPL 268
            ...:..:   |||       :||             |.|:|.....::..::.:..|.......:
  Fly   145 MNAYQSV---ASP-------QSS-------------PELSTDSQLSNEHFDMGLSPESEPESEAI 186

  Fly   269 DDQDDPTKNAEKVATDVFPCPDCERSFPLQQLLEIHRLN-H--TRSRSFQCLLCEKSFFSKYDLA 330
            |::|..:.:.         |..|...|.....|::|:.: |  .....|.|..|::.|.|...|.
  Fly   187 DNRDTSSSHT---------CSKCGLEFENVDELKLHKYHLHDIPPDTKFVCDHCDEGFRSAAALT 242

  Fly   331 KH-NFVHTGERPF--KCAICSKAFTRKALLHRHERTHTDVP--KFICVYCEKPFLSRQEMEKHAE 390
            :| |.::.   |.  .|..|...|....||..|::.....|  :.:|..|.|...:...::.|..
  Fly   243 RHCNMINL---PLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLV 304

  Fly   391 RHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQH-CERSFSTASKLARHLVAH--AGKR 452
            ||...|..:|..|:.||.....|..|:..|:|..|:.|:: |.::|...|..:.|...|  |.||
  Fly   305 RHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNCGKTFRFCSARSMHERVHMDASKR 369

  Fly   453 AYPCKYCHKSYMLSHHLSRHLRTHTQTSDASFVCSECKVSYSNYNDLLDHALIHATASLK 512
            .|.|:||.|||:.......|.:.|..|.|..  |..|::|:........|...:|..:|:
  Fly   370 IYQCEYCPKSYVTPSECRTHQKYHNLTRDHG--CEICRISFKTAKHYRSHLKSNAHKTLE 427

Known Domains:


GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 17/82 (21%)
COG5048 <281..506 CDD:227381 62/236 (26%)
C2H2 Zn finger 288..308 CDD:275368 5/21 (24%)
C2H2 Zn finger 316..336 CDD:275368 7/21 (33%)
zf-H2C2_2 328..353 CDD:290200 7/28 (25%)
C2H2 Zn finger 344..364 CDD:275368 6/20 (30%)
C2H2 Zn finger 372..388 CDD:275370 3/16 (19%)
C2H2 Zn finger 400..420 CDD:275368 6/20 (30%)
C2H2 Zn finger 428..448 CDD:275368 5/21 (24%)
C2H2 Zn finger 456..476 CDD:275368 7/20 (35%)
C2H2 Zn finger 486..506 CDD:275368 4/20 (20%)
HARE-HTH <566..625 CDD:294801
CG31388NP_650060.1 zf-AD 4..76 CDD:285071 15/77 (19%)
C2H2 Zn finger 228..254 CDD:275368 8/29 (28%)
C2H2 Zn finger 286..306 CDD:275368 5/20 (25%)
C2H2 Zn finger 314..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 342..363 CDD:275368 5/21 (24%)
C2H2 Zn finger 373..393 CDD:275368 7/20 (35%)
C2H2 Zn finger 401..419 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR24390
RoundUp 00.000 Not matched by this tool.
11.100

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