DRSC/TRiP Functional Genomics Resources

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Protein Alignment: pita and CG6689

Sequence 1:NP_611806.3 Gene:pita FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster

Alignment Length:522 Identity:119/523 (23%)
Similarity:194/523 (37%) Gaps:126/523 (24%)


  Fly     9 EAMLTEKRVCRFCLTEQKLASIFEENPRVKTTANLPLQIMAITAIEVYAG------DGMPGHICL 67
            |..|.|.:.||.|..:      |..:.|.|...: |...:.:..|||.:|      ...|..:|.
  Fly   158 EEKLEELQKCRTCYND------FTADFRAKDLFD-PANSVLLFHIEVISGVWISHKPDEPRLMCP 215

  Fly    68 ECRLLFEHCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETP 132
            .|:...:....|::||...|..|.|           .||......:.::            :|.|
  Fly   216 ACKSALDQAIDFREMCISTELKLSQ-----------AKPSTDEVQIEAE------------NENP 257

  Fly   133 KKLLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLE 197
                    .||...:|.|.   |:..|.....||...|       |.:..::.:.|.:.|..:.|
  Fly   258 --------ISSDHDLISDT---ENTNVEEIEDAGGDHV-------EDEATSDDQTSQEAVDEVAE 304

  Fly   198 DMASE----------LEKEFPD--------IPQKASPV--KPKVLNKSSIRILNKGPAAPVEPRL 242
            ..|::          :.||..|        ..:|.:|:  |||...|::      |...|  .|.
  Fly   305 SPAAQDPLSVALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAA------GEQKP--KRS 361

  Fly   243 ATPKVKRDDSGNVAIVTEVLDSDLPLDDQDDPTKNAE-KVATDVFPCPDCERSFPLQQLLEIHRL 306
            |.||.|                     ::.:..:.|: :.....|.|..|.::|.:...|.||.|
  Fly   362 ANPKTK---------------------EERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHML 405

  Fly   307 NHTRSRSFQCLLCEKSFFSKYDLAKH-NFVHTGERPFKCAICSKAFTRKALLHRHE-RTHTDVPK 369
            .|||::::||..|.|:|:..|....| ...|.||.||.|..||:.|.......:|| ..|...|:
  Fly   406 RHTRTKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPR 470

  Fly   370 FI-------------------CVYCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLER 415
            .|                   |..|:|.:.|:..:..|.:.|.....::|..|:||::....|:|
  Fly   471 LIVKRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKR 535

  Fly   416 HETVHSTNLPFPCQHCERSFSTASKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRTHTQTS 480
            ||..|... |..|..|.:.|...::|..|.:.|.|:|.|.|:.|:.::...:::..|..:.....
  Fly   536 HEMTHEKR-PLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQD 599

  Fly   481 DA 482
            :|
  Fly   600 NA 601

Known Domains:


GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 19/81 (23%)
COG5048 <281..506 CDD:227381 61/224 (27%)
C2H2 Zn finger 288..308 CDD:275368 7/20 (35%)
C2H2 Zn finger 316..336 CDD:275368 6/21 (29%)
zf-H2C2_2 328..353 CDD:290200 10/26 (38%)
C2H2 Zn finger 344..364 CDD:275368 6/21 (29%)
C2H2 Zn finger 372..388 CDD:275370 4/16 (25%)
C2H2 Zn finger 400..420 CDD:275368 8/20 (40%)
C2H2 Zn finger 428..448 CDD:275368 5/20 (25%)
C2H2 Zn finger 456..476 CDD:275368 3/20 (15%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 19/80 (24%)
zf-C2H2 385..407 CDD:278523 8/22 (36%)
C2H2 Zn finger 387..407 CDD:275368 7/20 (35%)
zf-H2C2_2 399..422 CDD:290200 11/23 (48%)
C2H2 Zn finger 415..436 CDD:275368 6/21 (29%)
C2H2 Zn finger 444..460 CDD:275368 4/16 (25%)
C2H2 Zn finger 492..512 CDD:275368 5/20 (25%)
C2H2 Zn finger 520..540 CDD:275368 8/20 (40%)
C2H2 Zn finger 547..567 CDD:275368 5/20 (25%)
zf-met 574..597 CDD:289631 3/23 (13%)
C2H2 Zn finger 575..591 CDD:275368 2/16 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2463
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
11.050

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