DRSC/TRiP Functional Genomics Resources

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Protein Alignment: pita and M1BP

Sequence 1:NP_611806.3 Gene:pita FlyBaseID:FBgn0034878 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_649825.1 Gene:M1BP FlyBaseID:FBgn0037621 Length:418 Species:Drosophila melanogaster

Alignment Length:492 Identity:113/493 (23%)
Similarity:189/493 (38%) Gaps:134/493 (27%)


  Fly     8 REAMLTEKRVCRFCLTEQKLASIFEENPRVKTTANLPL--QIMAITAIEVYAGDGMPGHICLECR 70
            :.|:...|..||.|   .|.|| .:.:|::...:|..:  .|.|:|.:.:.....:|..||..|.
  Fly     3 KSALKHLKSTCRVC---AKYAS-NKRSPKLFERSNTKMIDNIEALTGLRLENYGCLPDQICECCS 63

  Fly    71 LLFEHCYRFKQMCKRA--ETLLRQYPLTGNWPSPLEKPRAPMTMVASKKLLVVPAKTAEPSETPK 133
            :......:.::.|..|  |.||   .||       |:.|..::  |..:..|:.....:..:||.
  Fly    64 MELASAVKLRERCIAAQRELLL---GLT-------EEQRQGIS--AFYRAAVMGEDIVQTVKTPD 116

  Fly   134 KLLNTMAKSSSQVIIEDVQVLESAMVTPRTVAGSSPVPRRSHAYELKVDNNQELSMDDVQSMLED 198
            .  :.:..:..::::|:          |:.....:.|...:..||:...:..|   ||..|::|:
  Fly   117 D--DEVYATYQEIVLEE----------PKEEIDDTKVEYDNTYYEVAEGHAGE---DDAASLIEE 166

  Fly   199 ------MASELEKEFPDIPQKASPVKPKVLNKSSIRILNKGPAAPVEPRLATPKVKRDDSGNVAI 257
                  ||.:.|::           :...|::.:..|:.....|.|          .|....||:
  Fly   167 ADYDSIMAEDEEQQ-----------QTLELDEDTELIVGDVNDAYV----------YDSDDEVAV 210

  Fly   258 VTEVLDSDLPLDDQDDPTKNAE-----KVATD---------VFPCPDCERSFPLQQLLEIHRLNH 308
            :..|||.:  .:.::...|...     ||.:|         |:.|..|......:...|:|...|
  Fly   211 LDNVLDDE--YEHENIVVKKCSLPPKPKVRSDDARRRGTGGVYICEQCGNHIKGRMAFELHCRRH 273

  Fly   309 TRSRSFQCLLCEKSFFSKYDLAKHNFVHTGERPFKCAICSKAFTRKALLHRHERTHTDVPKFICV 373
            ...:.|.|.||:..|.:..:|.:|...|||||||.|..|.:.||......:||||||:       
  Fly   274 RGDKQFGCELCQSRFCTTSELKRHMRKHTGERPFACKYCGRCFTDYTTRVKHERTHTN------- 331

  Fly   374 YCEKPFLSRQEMEKHAERHQKKRPFQCGVCTKSFAFKQGLERHETVHSTNLPFPCQHCERSFSTA 438
                                 :||:.||.|.|                            :|:|.
  Fly   332 ---------------------ERPYVCGTCGK----------------------------AFTTG 347

  Fly   439 SKLARHLVAHAGKRAYPCKYCHKSYMLSHHLSRHLRT 475
            ..|..|::.|:|:|||.|:.|.||:||..|||.|.|:
  Fly   348 YILKNHMLIHSGERAYRCELCDKSFMLPTHLSTHFRS 384

Known Domains:


GeneSequenceDomainRegion External IDIdentity
pitaNP_611806.3 zf-AD 17..92 CDD:214871 20/79 (25%)
COG5048 <281..506 CDD:227381 58/205 (28%)
C2H2 Zn finger 288..308 CDD:275368 4/20 (20%)
C2H2 Zn finger 316..336 CDD:275368 6/20 (30%)
zf-H2C2_2 328..353 CDD:290200 13/25 (52%)
C2H2 Zn finger 344..364 CDD:275368 8/20 (40%)
C2H2 Zn finger 372..388 CDD:275370 0/16 (0%)
C2H2 Zn finger 400..420 CDD:275368 4/20 (20%)
C2H2 Zn finger 428..448 CDD:275368 4/20 (20%)
C2H2 Zn finger 456..476 CDD:275368 11/21 (52%)
C2H2 Zn finger 486..506 CDD:275368
HARE-HTH <566..625 CDD:294801
M1BPNP_649825.1 zf-AD 13..84 CDD:214871 18/75 (24%)
C2H2 Zn finger 253..273 CDD:275368 4/20 (20%)
COG5048 276..>331 CDD:227381 24/55 (44%)
C2H2 Zn finger 281..301 CDD:275368 6/20 (30%)
zf-H2C2_2 293..317 CDD:290200 12/24 (50%)
C2H2 Zn finger 309..329 CDD:275368 8/20 (40%)
zf-H2C2_2 324..346 CDD:290200 13/78 (17%)
C2H2 Zn finger 337..357 CDD:275368 8/48 (17%)
zf-H2C2_2 350..372 CDD:290200 11/22 (50%)
C2H2 Zn finger 365..383 CDD:275368 10/18 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2463
Isobase 1 0.950 0 Normalized mean entropy S3885
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
22.000

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