DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Dcp-1 and Strica

Sequence 1:NP_476974.1 Gene:Dcp-1 FlyBaseID:FBgn0010501 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001260718.1 Gene:Strica FlyBaseID:FBgn0033051 Length:527 Species:Drosophila melanogaster

Alignment Length:305 Identity:95/306 (31%)
Similarity:136/306 (44%) Gaps:49/306 (16%)


  Fly    12 VGIRSPNGSENRGSFIMADNTDAKGCTPESLVVGGATAASPLPANKFVARMPVERYASEYNMSHK 76
            :.:.|..|::.:.:.: |.:.||:|....||.:    :.|.|..||.   .|...|         
  Fly   269 ISLGSSGGTKPKVTAV-AQSQDAQGTISTSLGI----SKSSLTKNKL---KPARVY--------- 316

  Fly    77 HRGVALIFNHEFFDIPSLKSRTGTNVDAQELKKAFENLGFAVSVHKDCKLRDILKHVGKAAELDH 141
                  |||||.||..: :.|.|:..|.:.|:..||.|...|.|..|..|..|.|.|......|.
  Fly   317 ------IFNHERFDNKN-EFRKGSAQDVKVLRATFEQLKCKVEVITDATLVTIKKTVRMLQTKDF 374

  Fly   142 TDNDCLAVAILSHG-EHGYLYAKDTQYKLDNIWHYFTATFCPSLAGKPKLFFIQACQGDRLDGGI 205
            .|...|.:.||||| .|..:.|||..|.||:. ..|......:|..||||.|:|||:||...||.
  Fly   375 EDKSALVLVILSHGTRHDQIAAKDDDYSLDDD-VVFPILRNRTLKDKPKLIFVQACKGDCQLGGF 438

  Fly   206 TLEKGVTETDGESSTSYKIPIHADFLFSYSTIPGYFSWRNINNGSWYMQSLIRELNANGKKYDLL 270
            ..:  ..:.:|..:         :.|..|||..|:.|:|. .:|:.::|:|...||.:||..|:.
  Fly   439 MTD--AAQPNGSPN---------EILKCYSTYEGFVSFRT-EDGTPFIQTLCEALNRSGKTSDID 491

  Fly   271 TLLTFVNQRVALDFESNVPATPMMDRQKQIPCLTSMLTRILRFGD 315
            |::..|.|.|           .|..:.:|||.:||.||....|||
  Fly   492 TIMMNVRQVV-----------KMQSKDRQIPSVTSTLTSKYVFGD 525

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Dcp-1NP_476974.1 CASc 71..313 CDD:214521 78/243 (32%)
StricaNP_001260718.1 CASc 311..523 CDD:294037 80/252 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG3573
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR10454
RoundUp 00.000 Not matched by this tool.
22.000

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