DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bbx and Bbx

DIOPT Version :10

Sequence 1:NP_001027087.1 Gene:bbx / 3772670 FlyBaseID:FBgn0024251 Length:769 Species:Drosophila melanogaster
Sequence 2:XP_006522606.1 Gene:Bbx / 70508 MGIID:1917758 Length:937 Species:Mus musculus


Alignment Length:643 Identity:157/643 - (24%)
Similarity:244/643 - (37%) Gaps:194/643 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 KLQDCSSDTDDEDDEEEDLDEEEDDEEEAEIQVQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQ 270
            ||.|.|.: ::||:||||:|           :|||                              
Mouse    35 KLLDFSEE-EEEDEEEEDID-----------KVQL------------------------------ 57

  Fly   271 DQYSHQVEPRQLQQD--ETADNTRPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGD 333
                  :|...|:||  ||.|:..||..|||||||||:||||||.:|::.:..|:||..||||.|
Mouse    58 ------LEADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD 116

  Fly   334 WWAALDEQEKHCFTDLAQQNKDAFFNANPNFKW-------YKLPAP---PLRTLATRPSNASAGL 388
            |||.||.:||..:||:|::.||||..|||.::|       .|.|.|   |.:.|...|.::|..|
Mouse   117 WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRWCPTTNKPVKSPTPTVNPRKKLWAFPPDSSRDL 181

  Fly   389 LIPSEDQPQQQVPTSLQVQWAERGEMPRAMLRPNYFKLADETQMGELSSLL-------------- 439
              |:..:.:.:||   |:.                |.:||.||||.||.||              
Mouse   182 --PTPKKAKTEVP---QLN----------------FGMADPTQMGGLSMLLLAGEHALGTPEASS 225

  Fly   440 ---------QVQVQEKD--FALQQVLSETSQ-------------FLSAHMPAGNTNGNGNKRSLQ 480
                     ..::::|.  |...::.|.||.             |..|.:.:..:...|.:...:
Mouse   226 GTCRPDISESPELRQKSPLFQFAEISSRTSHPDAPSKQCQASALFQFAEISSSTSQLGGTEPVKR 290

  Fly   481 DNNSSNSSEEEAASGS-----SPNKKVKSSRSCKGKIYQELVNSG-----------------QLA 523
            ..||:.....|....|     ...|.:||..|..|:|  |.:..|                 :.|
Mouse   291 CGNSALFQLAEMCLASEGVKMEDTKLIKSKESDGGRI--EEIEKGKEERGTEVEKTTETSFQKEA 353

  Fly   524 AIAKKSKARLPPAGNMGGNFVDIPLDAGPNTPPVSPPERQGSSPDSMQK--HIRSVSESSSSGFF 586
            ...|.:|..:..:.:: .:...:.:| ......|..|:.....|:..||  |....|.|:||...
Mouse   354 EFGKSAKGNVRESKDL-RDIEQLQMD-NVMAIKVEDPKEIRKEPEDDQKYSHFPDFSYSASSKII 416

  Fly   587 DLEEKIKELPA-------------LSLDAYLQRKRSTKKKKKFSGTKKQRNSNST---------- 628
                 |..:|:             :.....|.:....|||||.:...:..|..||          
Mouse   417 -----ISGVPSRKDHMCHPHGIMIIEDPTTLNKPEKIKKKKKKNKLDRHGNDKSTPKKTCKKRQS 476

  Fly   629 SGASATSNVAAADAAAKGAVPLSSEQHVRIKQQQLQAVG----------SQRRKARKESITRRDV 683
            |.:...|.:...:|.|||...:........|:.:..:.|          .::.|::::.:::...
Mouse   477 SESDIESVMYTIEAVAKGDWGVDKLGETPRKKVRPSSSGKGGILDAKPPKKKVKSKEKKVSKEKC 541

  Fly   684 SAIEQEVASILPLTINGSYYFNQSGAPKAVNAPVTSSSASPPLSSNSSSSSSSLSSQA 741
            |.|.:|......|:|:.|         |:|...|.....:.||:....:...||..||
Mouse   542 SDITKESRPPDFLSISAS---------KSVPGEVPEGIKAEPLTPTEDALPPSLPGQA 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbxNP_001027087.1 HMG-box_HBP2 298..366 CDD:438805 40/67 (60%)
BbxXP_006522606.1 HMG-box_HBP2 81..149 CDD:438805 40/67 (60%)
DUF2028 190..321 CDD:430742 29/149 (19%)

Return to query results.
Submit another query.