DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbx and Sox7

DIOPT Version :9

Sequence 1:NP_001027087.1 Gene:bbx / 3772670 FlyBaseID:FBgn0024251 Length:769 Species:Drosophila melanogaster
Sequence 2:NP_001099515.1 Gene:Sox7 / 290317 RGDID:1310038 Length:383 Species:Rattus norvegicus


Alignment Length:153 Identity:40/153 - (26%)
Similarity:63/153 - (41%) Gaps:22/153 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 ETADNTRP------------EHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAAL 338
            |.:|...|            |...|||||||:::.|..|..:..:...|.|..::|:||..|.||
  Rat    22 ELSDGLSPPAVPRPSGDKGSESRIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKAL 86

  Fly   339 DEQEKHCFTDLAQQNKDAFFNANPNFKWYKLPAPPLRTLATRPSNASAGLLIPSEDQPQQQVPTS 403
            ...:|..:.|.|::.:.......||:|:........:.|..|   ...|.|:.|..:.|..:|..
  Rat    87 TLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQGKRLCKR---VDPGFLLSSLSRDQNTLPEK 148

  Fly   404 LQV------QWAERGE-MPRAML 419
            ..:      :..:||| .|.|.|
  Rat   149 NSIGRGPLGEKEDRGEYAPGATL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbxNP_001027087.1 SOX-TCF_HMG-box 296..367 CDD:238684 23/70 (33%)
Sox7NP_001099515.1 SOX-TCF_HMG-box 44..115 CDD:238684 23/70 (33%)
Sox_C_TAD 178..381 CDD:288887
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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