DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbx and bbx

DIOPT Version :10

Sequence 1:NP_001027087.1 Gene:bbx / 3772670 FlyBaseID:FBgn0024251 Length:769 Species:Drosophila melanogaster
Sequence 2:XP_002932333.2 Gene:bbx / 100487237 XenbaseID:XB-GENE-981428 Length:962 Species:Xenopus tropicalis


Alignment Length:638 Identity:166/638 - (26%)
Similarity:255/638 - (39%) Gaps:198/638 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 DDEEEDLDEEEDDEEEAEIQVQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEPRQL 282
            |..||  ||||:|||:.: :|||                 :|.|                   .|
 Frog   101 DFSEE--DEEEEDEEDID-KVQL-----------------LDGD-------------------GL 126

  Fly   283 QQDETADNTRPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCFT 347
            :.|||.||...|..|||||||||:||||||.:|::.:..|:||..||||.||||.||..||..:|
 Frog   127 ENDETEDNDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAYLDPNEKQKYT 191

  Fly   348 DLAQQNKDAFFNANPNFKWYKLPAPPLRTLATRPSNASAGLLIPSEDQPQQQVPTSLQVQWAERG 412
            |:|::.||||..|||.:||......|::  |..|:..:...|.....:..:.||:..:|  .:..
 Frog   192 DMAKEYKDAFMKANPGYKWCPTTNKPVK--AHSPTVTTRKKLWSFSSETVKDVPSPKKV--PQED 252

  Fly   413 EMPRAMLRPNYFKLADETQMGELSSLL-----------------QVQ------------------ 442
            |||:.     .|.:||.||||.||.||                 :|:                  
 Frog   253 EMPQL-----NFSIADPTQMGGLSMLLLAGEHALTAHGDHAVTERVEHLLSDHEVSSGICPLTES 312

  Fly   443 ---VQEKD---FALQQVLSETS-----------------QFLSAHMPAGNTNGNGNKRSLQDNNS 484
               .:.:|   |...::.|.||                 ||.........|..|....:....||
 Frog   313 GFPQENRDTSLFQFDEISSSTSHSDDPAPAEQSEKSTLFQFAEISSDTSQTQINCVDPAKCCGNS 377

  Fly   485 SNSSEEEAASGSSPNKKVKSSRSC-KGKIYQELVNSGQLAAIAKKSKARLPPAGNMGGNFVDIPL 548
            |.....|.:|.||.:....|::.| ...::       |||.:.:.|:|            |.|.:
 Frog   378 SLFQLAEISSSSSHSDSSASAKQCGTSALF-------QLAEMCEASEA------------VKIEI 423

  Fly   549 DAGPNT-----PPVSPPER-QGSSPDSMQK------HIRSVSESSSSGFFDLEEKIKELPALSLD 601
            ....:|     .|||..|. :.||.|.:.:      ||...:|:::.       |.|:..|.:|:
 Frog   424 SRNVDTDDLVRTPVSIKEEIESSSEDLISRNLNDSSHICEKAETNNI-------KTKKHKAHTLE 481

  Fly   602 -------AYLQRKRSTKKKKK---------FSGTKKQRNSNSTSGASATSNVAAADAAAKG---- 646
                   ..|:|::..|||||         .:..||......:|.:...|.:...:|.|||    
 Frog   482 PIDAELLGLLKREKLKKKKKKNKSDHDAAEKASPKKTCKKRQSSESDIESVMYTIEAVAKGDWGI 546

  Fly   647 -AVPLSSEQHVRIK----------QQQLQAVGSQRRKARKE--SITRRDVSAIEQEV-ASILPLT 697
             .:|:|..:..||.          :...:.|.|:.:|.:|:  |.:.:::||.|..: |.|:.| 
 Frog   547 EQIPISPSKKARISTSPKHSIFDLKSAKKKVKSKEKKMQKDKPSDSTKELSAPEHIITAPIIDL- 610

  Fly   698 INGSYYFNQSGAPKAVNA-PVTSSSASPPL---------SSNSSSSSSSLSSQ 740
                    .|..|::|.: |.:.:...||:         ..||:..:.:..|:
 Frog   611 --------PSETPESVKSEPPSPTEELPPMCLPEMLKTEDFNSNKKTETCGSR 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbxNP_001027087.1 HMG-box_HBP2 298..366 CDD:438805 40/67 (60%)
bbxXP_002932333.2 HMG-box_HBP2 142..210 CDD:438805 28/67 (42%)
DUF2028 253..432 CDD:430742 47/237 (20%)

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