DRSC/TRiP Functional Genomics Resources

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Protein Alignment bbx and sox6

DIOPT Version :9

Sequence 1:NP_001027087.1 Gene:bbx / 3772670 FlyBaseID:FBgn0024251 Length:769 Species:Drosophila melanogaster
Sequence 2:XP_031755685.1 Gene:sox6 / 100144640 XenbaseID:XB-GENE-483934 Length:804 Species:Xenopus tropicalis


Alignment Length:486 Identity:106/486 - (21%)
Similarity:175/486 - (36%) Gaps:101/486 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SPAAASYVSGLSRDFLISRELSQRSGEFLTAAAKM------------VSQMG-ASELRWL-PISR 146
            |..||:..||||...|.....:|.:...::..||:            :|..| .||.|.. |:::
 Frog   338 STMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKIPTTPQPANAPGTLSPTGMKSEKRGTSPVAQ 402

  Fly   147 TKD----------KPSSAGEAEAKTLVREG---ESQGSPGKVA-KSALGDP-------------Q 184
            .||          :|.:|...::.|...:.   .|:.||..:: ||.:..|             .
 Frog   403 IKDEAAQPLNLSARPKTADPIKSPTSPTQSFFPVSKTSPVSLSNKSGIPSPIRGPSLDILSSLNS 467

  Fly   185 PQRTEDQENAFRRIEDVH-----------------------NYAKLQDCSSDTDDEDDEEEDLDE 226
            |....||:...:.|::..                       |...|.:|.||....|.....:..
 Frog   468 PALFGDQDTVMKAIQEARKMREQIQREQLLTPHSIDGKLPINNMGLNNCRSDKMLLDAVTGKICI 532

  Fly   227 EEDDEEEAEIQVQLPVQQEVTRIRREAAEEHVDVDVVTVPQQEQDQYSHQVEPRQLQQDETADNT 291
            .....|....:...|   ::|....|..:....|..:|.| ::.:..:..||.|..:  :|...:
 Frog   533 RSAHTERTHFENLGP---QLTGKPNEDGKLGPGVIDLTRP-EDVEGGATVVEARVYR--DTRGRS 591

  Fly   292 RPEHHARRPMNAFLIFCKRHRGIVKERYKTLENRAITKILGDWWAALDEQEKHCFTDLAQQNKDA 356
            ..|.|.:||||||:::.|..|..:.:.:..:.|..|:||||..|.|:..|||..:.:...:....
 Frog   592 SSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQEKQPYYEEQARLSKI 656

  Fly   357 FFNANPNFKWYKLPAPPLRTLATRPSNASAG---LLIPSEDQ---------PQQQVPTSLQVQWA 409
            .....||:| || |.|. ||..........|   .|:.|..|         .|.|:|.|      
 Frog   657 HLEKYPNYK-YK-PRPK-RTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPIS------ 712

  Fly   410 ERGEMPRAMLRPNYFKLADETQMGELSSLLQVQVQEKDFALQQVLSETSQFLSAHMPAGNTNGNG 474
                .|..::.|....:|..|...:::|.........:.::..:.|.....|.:....||...||
 Frog   713 ----TPTGVVYPGTISMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKLDSGSLGGNDLMNG 773

  Fly   475 -NKRSLQDN-----NSSNSSEEEAASGSSPN 499
             ::..:.|:     .|..||:.||....|.|
 Frog   774 EDEMEMYDDFEDDPKSDYSSDNEANEAVSAN 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bbxNP_001027087.1 SOX-TCF_HMG-box 296..367 CDD:238684 23/70 (33%)
sox6XP_031755685.1 SOX-TCF_HMG-box 596..667 CDD:238684 23/71 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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