DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp22 and RTM2

DIOPT Version :10

Sequence 1:NP_001027114.1 Gene:Hsp22 / 3772576 FlyBaseID:FBgn0001223 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_568144.1 Gene:RTM2 / 830370 AraportID:AT5G04890 Length:366 Species:Arabidopsis thaliana


Alignment Length:142 Identity:30/142 - (21%)
Similarity:56/142 - (39%) Gaps:32/142 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ARWQEQEFAPPATVNKDGYKLTLDVKDYSELKVKVL---DESVVLVEGKSEQQEAEQGGYSSRHF 107
            :.|::|   |.||:      |.:|:..:::.::||.   ...::.|.|     |..........|
plant    23 SEWKDQ---PEATI------LNIDLTGFAKEQMKVTYVHSSKMIRVTG-----ERPLANRKWSRF 73

  Fly   108 LRRFVLPEGYEADKVTSTLSSDGVLTISVPNP-----PGVQETLKEREVTIEQTG---------E 158
            ...|.:|:....||:..:..:: ||||::|..     ..:.||.:.....:|:..         |
plant    74 NEVFTVPQNCLVDKIHGSFKNN-VLTITMPKETITKVAYLPETSRTEAAALEKAAKLEEKRLLEE 137

  Fly   159 PAKKSAEEPNDK 170
            ..:|..||...|
plant   138 SRRKEKEEEEAK 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp22NP_001027114.1 metazoan_ACD 61..138 CDD:107247 16/79 (20%)
RTM2NP_568144.1 ACD_sHsps-like 24..103 CDD:107221 21/93 (23%)

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