DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp22 and sip-1

DIOPT Version :10

Sequence 1:NP_001027114.1 Gene:Hsp22 / 3772576 FlyBaseID:FBgn0001223 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_499316.1 Gene:sip-1 / 176471 WormBaseID:WBGene00004798 Length:159 Species:Caenorhabditis elegans


Alignment Length:118 Identity:33/118 - (27%)
Similarity:55/118 - (46%) Gaps:11/118 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FHAFFHEPPVWSV--ALPRNWQQIARWQEQEFAPPATVNKDGYKLTLDVKDY--SELKVKVLDES 84
            |..|....|.|:.  ::..|:..|...|..|....|    ..:.:.|||..:  .||||. |:..
 Worm    15 FRDFEDMMPYWAQRHSMLNNFNNIVPQQLNEVENTA----QKFCVKLDVAAFKPEELKVN-LEGH 74

  Fly    85 VVLVEGKSEQQEAEQGGYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVP 137
            |:.:||..|.:  .:.|:|.|.|.|:|.||:..:...:.:.::.:|.:||..|
 Worm    75 VLTIEGHHEVK--TEHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAP 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp22NP_001027114.1 metazoan_ACD 61..138 CDD:107247 24/79 (30%)
sip-1NP_499316.1 metazoan_ACD 45..126 CDD:107247 26/88 (30%)

Return to query results.
Submit another query.