DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: Hsp22 and Hspb8

Sequence 1:NP_001027114.1 Gene:Hsp22 FlyBaseID:FBgn0001223 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_446064.1 Gene:Hspb8 RGDID:71003 Length:196 Species:Rattus norvegicus

Alignment Length:136 Identity:43/137 (31%)
Similarity:65/137 (47%) Gaps:28/137 (20%)


  Fly    17 MPRLSSPFHAFFHEPPVW-----SVALPRNWQQIARW---QEQEFAPPATVNKDGYKLTLDVKDY 73
            :|||||          .|     |..:||.....||:   .|....||  ...:.:|:.::|..:
  Rat    53 LPRLSS----------AWPGTLRSGMVPRGPTATARFGVPAEGRNPPP--FPGEPWKVCVNVHSF 105

  Fly    74 --SELKVKVLDESVVLVEGKSEQQEAEQGGYSSRHFLRRFVLPEGYEADKVT--STLSSDGVLTI 134
              .||.||..| ..|.|.||.|::: ::||..|::|.::..||.  |.|.||  ::||.:|:|.|
  Rat   106 KPEELMVKTKD-GYVEVSGKHEEKQ-QEGGIVSKNFTKKIQLPA--EVDPVTVFASLSPEGLLII 166

  Fly   135 SVPNPP 140
            ..|..|
  Rat   167 EAPQVP 172

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Hsp22NP_001027114.1 IbpA 17..154 CDD:223149 43/137 (31%)
metazoan_ACD 61..138 CDD:107247 28/81 (35%)
Hspb8NP_446064.1 ACD_HspB8_like 80..170 CDD:107235 31/96 (32%)
IbpA <105..173 CDD:223149 27/73 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C65200166
eggNOG 1 0.900 E1_KOG3591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 1 0.960
32.790

Return to query results.
Submit another query.