Protein Alignment CG11889 and nhr-246

DIOPT Version :10

• Sequence 1: NP_651367.1
• Gene: CG11889 / 3772506
• FlyBaseID: FBgn0039308
• Length: 417
• Species: Drosophila melanogaster
• Sequence 2: NP_001256661.1
• Gene: nhr-246 / 191499
• WormBaseID: WBGene00014192
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 410
• Identity: 84/410 - (20%)
• Similarity: 148/410 - (36%)
• Gaps: 98/410 - (23%)

  Fly    20 KKLRVYFKNDTLNLKKLTIK-PATANG----ENYASVMTRISVEYITKDSKDNQSATFLLKTTFA 79
            :|:|::|.||.|. |.:.:| |....|    ||....:..:....:.:...:.:...:.|.::.:
 Worm    48 RKVRLHFDNDDLP-KHVVLKIPQNTKGCSVVENAGGGVKNVDHSVVERFMHNTECNYYKLFSSLS 111

  Fly    80 DKD---PAAHLLINYGIYTREIDMYEQILPRLADIVKNELHDSRKLFAATVGVDRERDSIMFEDL 141
            :|.   |..:|....|   .:..:...:|..|.|.   :|||....|.              ||
 Worm   112 EKPLQIPTTYLASKAG---EKAPVPVIVLEMLEDC---KLHDLIPGFN--------------ED- 155

  Fly   142 SLERYKVACRVKKLDLEHTY-LVLEKLADFHAAGAALAQRQPGIFEKNYDRGFFNKHVR------ 199
              :.:|:...:.||   |.: |..||..:.....:.||.           .||....|.
 Worm   156 --QLFKIVDELVKL---HIFSLTTEKWKEIVPDESKLAM-----------SGFLQCMVADVGRKL 204

  Fly   200 GYEPIMKNILKALSRTLDLSPDLKERYQAKIDRLIDNVMDYGERSTSVAPGDFVTLAHGDIWTTN 264
            ...|.:..||..:..|||..|:..::.:   |..|:      |...||       :.|||:|...
 Worm   205 AQNPELGVILSYVENTLDTDPNYLQKMR---DEYIN------EERPSV-------ICHGDLWAPQ 253

  Fly   265 VMFQYDDEGHPVNAIFIDFQFSVWNSPAIDLQYFFSTSIHENLRLERQTELVQFYFYKLVVAL-- 327
            :::..:|.    .|..:|:|.:...||..||.:..||......|......|:..|:.||.|.|
 Worm   254 ILWDKEDN----IAGIVDWQATHRGSPMEDLHHILSTCTSVQNRKTFTKPLLDHYYNKLKVGLKE 314

  Fly   328 ---------ERVKYSGKVPSLFEFQQQFRTKGFYAVFASLIFEPTMVYNGKEEPSIEQFMTSDEK 383
                     |.:........::...:.....||:|      ..|.:..:||.:|.     ...|.
 Worm   315 KGFKTTWTREEIDIEYNYSFIYGASRTIFANGFWA------NSPVLQTDGKPDPE-----RIKES 368

  Fly   384 GVRLRDAVYQTEENLKKLHL 403
            .||.:..:   |:.:::|::
 Worm   369 FVRCKSYL---EDTIRELNI 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11889	NP_651367.1	EcKL	44..332	CDD:397213	63/312 (20%)
nhr-246	NP_001256661.1	CHK	134..314	CDD:214734	54/233 (23%)