DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tyler and mtm1

DIOPT Version :10

Sequence 1:NP_608327.2 Gene:Tyler / 3772349 FlyBaseID:FBgn0031038 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_595818.1 Gene:mtm1 / 2541312 PomBaseID:SPBP23A10.06 Length:335 Species:Schizosaccharomyces pombe


Alignment Length:440 Identity:124/440 - (28%)
Similarity:190/440 - (43%) Gaps:135/440 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MENGGEEEGCRLECKEMDPLRLTTLILSADPRYRIKPMQQVVSALVGGLITTFVVTPLEVVKTRV 73
            |:.|...||...:           |.::|:|  .:||:.:::||.||.:|||..||||:|||||:
pombe     1 MQIGAATEGVEAD-----------LSVNAEP--DVKPIAKMLSACVGSVITTLTVTPLDVVKTRL 52

  Fly    74 QTQHAIRQRPTVSKLCYVYHNGLMTHVCRSSDICVPKPGRDPQNLRPLRGAMDAFVKIVCTSGFS 138
            |:: :|.|..:             |....|:.|.    |:.....:||.|.:....:|....|..
pombe    53 QSE-SISQYSS-------------TQPISSAKIL----GKGRPAPKPLGGPVSGLYQIARHEGVR 99

  Fly   139 GLWAGLSPTLVSALPSTIIYFLTYEYIKNSLSHIYLVSQKFEESGMKDQVPGADGGDPLDQATRG 203
            .||.||.|:|...||:..:.||.||    .|..:|                 :|.|.|       
pombe   100 SLWRGLVPSLTMLLPANTVQFLGYE----QLLPLY-----------------SDWGFP------- 136

  Fly   204 INVSATAPVSTASLPYYVPMASGICSRTIVVTAITPIEMVRIKMQSEYMTYA---------ELWR 259
                |.|.::.||            :|||..|.::|||:.|.::|:....|.         |::.
pombe   137 ----AAAAIAGAS------------ARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFD 185

  Fly   260 VLRSLIRQHGILGLWRGWPPTVMRDAPFSGTYWAVYEAIK---------RAFSVTEPT--FLFSF 313
            .|:.:|.|.|||.||.|...|:.||.|||..||..||.|:         :|||.::.|  ...:|
pombe   186 GLKLMIHQKGILNLWSGVSVTLWRDVPFSAFYWWSYERIRLFLLGHPSLQAFSSSQSTKDLYINF 250

  Fly   314 LTGAISGAVATFVTMPFDLITTHTQIELGQDVLYEEIGAGTGAGTGTGAGARPKTPQSAVANSRP 378
            ::|.|||.:||.:|.|||:..|..|:                                     ..
pombe   251 VSGGISGTLATLLTQPFDVSKTAKQV-------------------------------------HG 278

  Fly   379 SVLSR---MRQIYRLQGVRGLYVGVMPRMLRVVPACAIMISTFEYSKSFF 425
            ..|:|   |..:::..|.:.|:.|.:||.::|.|:||||||::..:|.:|
pombe   279 HTLTRGQFMLTLWKRGGPKALWKGTLPRCVKVAPSCAIMISSYHLTKKYF 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TylerNP_608327.2 Mito_carr 41..171 CDD:395101 43/129 (33%)
Mito_carr 216..303 CDD:395101 33/104 (32%)
Mito_carr 306..429 CDD:395101 32/125 (26%)
mtm1NP_595818.1 Mito_carr 21..132 CDD:395101 44/149 (30%)
Mito_carr 148..231 CDD:395101 30/82 (37%)
Mito_carr 242..331 CDD:395101 32/124 (26%)

Return to query results.
Submit another query.