DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp4

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_063138681.1 Gene:Fabp4 / 79451 RGDID:69309 Length:142 Species:Rattus norvegicus


Alignment Length:130 Identity:65/130 - (50%)
Similarity:81/130 - (62%) Gaps:8/130 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :||| .:||..|||||:||||:|||..|||:.....|.:.:::|||...:.:.||||.:.|||||
  Rat     4 AFVG-TWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNLIISVEGDLVVIRSESTFKNTEISFKL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELITL--IPHLT----PSQH 124
            ||||||.|.|.|.|||||||||..|...||.| |.|||.|....::|:.:  ..||.    |..|
  Rat    68 GVEFDEITPDDRKVKSIITLDGGVLVHVQKWDGKSTTIKRRRDGDKLVVVSYAAHLAVLSGPQDH 132

  Fly   125  124
              Rat   133  132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 61/116 (53%)
Fabp4XP_063138681.1 None

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