DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp3

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_063144532.1 Gene:Fabp3 / 79131 RGDID:69048 Length:138 Species:Rattus norvegicus


Alignment Length:113 Identity:61/113 - (53%)
Similarity:78/113 - (69%) Gaps:2/113 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :||| .:||..|:|||:|||.||||..||::.:...||..:...|||.|:.|.||||.:.|||:|
  Rat     4 AFVG-TWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDTITIKTHSTFKNTEISFQL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGD-KPTTIVREFTDNELI 113
            ||||||.|.|.|.|||::||||.||...||.| :.||:.||.:|.:||
  Rat    68 GVEFDEVTADDRKVKSVVTLDGGKLVHVQKWDGQETTLTRELSDGKLI 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 61/113 (54%)
Fabp3XP_063144532.1 None

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