DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and fabp4b

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001018394.1 Gene:fabp4b / 553579 ZFINID:ZDB-GENE-050522-391 Length:134 Species:Danio rerio


Alignment Length:113 Identity:48/113 - (42%)
Similarity:69/113 - (61%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTL-EGDTYTLTTTSTFKTSAISFKL 66
            :|| |:|:..|:|||||||.:|....:|:|.|...|::.:.: |....|:...:||||..|.|||
Zfish     5 YVG-KWKMTSSDNFDEYMKAVGASFASRQMANLAKPSLLIAVDEQGVITMKAVTTFKTLEIKFKL 68

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKGDKPTTIV-REFTDNELI 113
            ..||||.|.|.|.||:.::|...||.|:|..:..|||: ||..|.::|
Zfish    69 DEEFDETTADDRKVKTTMSLADGKLIQKQTWEGKTTIIEREIQDTKMI 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 48/113 (42%)
fabp4bNP_001018394.1 FABP11 4..132 CDD:381249 48/113 (42%)

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