DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and crabp2b

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001307323.1 Gene:crabp2b / 503502 ZFINID:ZDB-GENE-050208-52 Length:146 Species:Danio rerio


Alignment Length:114 Identity:40/114 - (35%)
Similarity:72/114 - (63%) Gaps:8/114 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLS--PTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEF 70
            :|:..||||:|.:|.|||.:..||:..:.:  |.||::.:|::.::.|:::.:|:.:||.:|..|
Zfish    16 WKMKSSENFEELLKALGVNVFLRKIAVAAASKPAVEISQQGESLSVQTSTSVRTTHVSFTVGESF 80

  Fly    71 DEETLDGRNVKSIITLDGN-KLTQE---QKGDKP-TTIVREFT-DNELI 113
            :|.|:|||...|....:.: |::.|   |||:.| |:..||.| |.::|
Zfish    81 NETTVDGRPCTSFPKWETDCKISCEQTLQKGEGPETSWTRELTNDGQMI 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 40/114 (35%)
crabp2bNP_001307323.1 lipocalin_FABP 11..146 CDD:471979 40/114 (35%)

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