DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Rbp2

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_036772.2 Gene:Rbp2 / 24710 RGDID:3544 Length:134 Species:Rattus norvegicus


Alignment Length:110 Identity:42/110 - (38%)
Similarity:68/110 - (61%) Gaps:2/110 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKLGVEFDE 72
            ::::.:|||:.|||.|.:...|||:...|:.|..:..:||.:...|.|||:...:.|.:||||||
  Rat     9 WEMESNENFEGYMKALDIDFATRKIAVRLTQTKIIVQDGDNFKTKTNSTFRNYDLDFTVGVEFDE 73

  Fly    73 ET--LDGRNVKSIITLDGNKLTQEQKGDKPTTIVREFTDNELITL 115
            .|  |||||||:::|.:||.|...|||:|.....:::.:.:.:.|
  Rat    74 HTKGLDGRNVKTLVTWEGNTLVCVQKGEKENRGWKQWVEGDKLYL 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 42/110 (38%)
Rbp2NP_036772.2 CRBP2 4..134 CDD:381238 42/110 (38%)

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