DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and Fabp4

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_006530111.1 Gene:Fabp4 / 11770 MGIID:88038 Length:149 Species:Mus musculus


Alignment Length:96 Identity:47/96 - (48%)
Similarity:62/96 - (64%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFKL 66
            :||| .:||..|||||:||||:|||..|||:.....|.:.:::.||..|:.:.||||.:.|||||
Mouse     4 AFVG-TWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDLVTIRSESTFKNTEISFKL 67

  Fly    67 GVEFDEETLDGRNVKSIITLDGNKLTQEQKG 97
            ||||||.|.|.|.||    :...:|.|.:.|
Mouse    68 GVEFDEITADDRKVK----VRNKELMQSEGG 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 47/96 (49%)
Fabp4XP_006530111.1 lipocalin_FABP 2..>82 CDD:471979 42/78 (54%)

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