DRSC/TRiP Functional Genomics Resources

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Protein Alignment fabp and fabp6

DIOPT Version :10

Sequence 1:NP_001027179.1 Gene:fabp / 3772232 FlyBaseID:FBgn0037913 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_002940224.2 Gene:fabp6 / 100487630 XenbaseID:XB-GENE-994094 Length:127 Species:Xenopus tropicalis


Alignment Length:108 Identity:35/108 - (32%)
Similarity:56/108 - (51%) Gaps:10/108 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFVGKKYKLDKSENFDEYMKELGVGLVTRKMGNSLSPTVEVTLEGDTYTLTTTSTFKTSAISFK 65
            |:|.| ||:::..||:|.:||.:|:...|.:.|.....|.||...|:|:|.:......|...:|.
 Frog     1 MAFTG-KYEVESQENYDAFMKAIGIPAETIEKGRDFKFTTEVVQNGNTFTWSQIYPGHTMTNTFT 64

  Fly    66 LGVEFDEETLDGRNVKSIITLDGNKL---------TQEQKGDK 99
            :|.|.|.||:.|:..|:::.|:|.|:         |.|..|.|
 Frog    65 IGQESDMETMSGKKFKAVVQLEGGKIIVDFGKYKHTSEIVGGK 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fabpNP_001027179.1 FABP_pancrustacea 2..116 CDD:381252 34/107 (32%)
fabp6XP_002940224.2 lipocalin_FABP 2..125 CDD:471979 34/107 (32%)

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