Protein Alignment CG17768 and SmD1

DIOPT Version :9

• Sequence 1: NP_001027236.1
• Gene: CG17768 / 3772012
• FlyBaseID: FBgn0032240
• Length: 154
• Species: Drosophila melanogaster
• Sequence 2: NP_524774.1
• Gene: SmD1 / 44668
• FlyBaseID: FBgn0261933
• Length: 124
• Species: Drosophila melanogaster
• Alignment Length: 121
• Identity: 39/121 - (32%)
• Similarity: 61/121 - (50%)
• Gaps: 12/121 - (9%)

  Fly    12 SH-PMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEV 75
            || .:.:|||||...:|.:...|..||.:|:.|..|.|:.|.. .:....|||:.|:|..:||.:
  Fly    11 SHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLETLSIRGNNIRYFILPDSL 74

  Fly    76 -IDMVKEDAQAKSRNRTEMNKNRGGNSSQNQRGGRPGGGNRNNVGNRPGQGYGGAA 130
             ::.:..|...||:.: :.:..|.||..:. ||.|..||.|       |:|.|.|:
  Fly    75 PLETLLIDDTPKSKTK-KKDSGRVGNRGRG-RGARGRGGPR-------GRGRGRAS 121

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17768	NP_001027236.1	LSm4	2..77	CDD:212470	23/66 (35%)
SmD1	NP_524774.1	Sm_D1	2..93	CDD:212471	26/83 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45460804
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840