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Protein Alignment CG17768 and SmD1
DIOPT Version :10
| Sequence 1: | NP_001027236.1 |
Gene: | CG17768 / 3772012 |
FlyBaseID: | FBgn0032240 |
Length: | 154 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_524774.1 |
Gene: | SmD1 / 44668 |
FlyBaseID: | FBgn0261933 |
Length: | 124 |
Species: | Drosophila melanogaster |
| Alignment Length: | 121 |
Identity: | 39/121 - (32%) |
| Similarity: | 61/121 - (50%) |
Gaps: | 12/121 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 SH-PMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEV 75
|| .:.:|||||...:|.:...|..||.:|:.|..|.|:.|.. .:....|||:.|:|..:||.:
Fly 11 SHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPV-HLETLSIRGNNIRYFILPDSL 74
Fly 76 -IDMVKEDAQAKSRNRTEMNKNRGGNSSQNQRGGRPGGGNRNNVGNRPGQGYGGAA 130
::.:..|...||:.: :.:..|.||..:. ||.|..||.| |:|.|.|:
Fly 75 PLETLLIDDTPKSKTK-KKDSGRVGNRGRG-RGARGRGGPR-------GRGRGRAS 121
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG17768 | NP_001027236.1 |
LSm4 |
2..77 |
CDD:212470 |
23/66 (35%) |
| SmD1 | NP_524774.1 |
Sm_D1 |
2..93 |
CDD:212471 |
26/83 (31%) |
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