DRSC/TRiP Functional Genomics Resources

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Protein Alignment: yellow-d2 and YBR053C

Sequence 1:NP_611788.1 Gene:yellow-d2 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_009609.1 Gene:YBR053C SGDID:S000000257 Length:358 Species:Saccharomyces cerevisiae

Alignment Length:166 Identity:29/167 (17%)
Similarity:54/167 (32%) Gaps:61/167 (37%)


  Fly    90 YVTNEMR------PNGTLL-------------QAYPSYE------WHKSHGADCNGL-TSVYRTQ 128
            |||:.:.      |.|.||             |::.|.|      |....|.....| .:|:.|.
Yeast   213 YVTDSLNFTIWKCPGGDLLKRDELIDVKNSNNQSFESPEPDGSAIWFSKDGKHSGFLFITVWSTS 277

  Fly   129 IDECGRMWILDSGEIDFIQHCPPQLYAIDLESGKVAHQYKMPKRLYKEGVSRFVTPTVELDPHNC 193
                                   ::...||.:||:..::.:|::..:.....||...:.:...|.
Yeast   278 -----------------------KVQMFDLTNGKLLKEFILPEQTPRVSCCCFVGKDLFVTTANA 319

  Fly   194 DV------------GFVYMADSIGDGIVVYDVAAQQ 217
            ::            |.:|...::.||.|..:...:|
Yeast   320 EINDAVRTNTDKNGGCIYKIPNVLDGNVPLESTKRQ 355

Known Domains:


GeneSequenceDomainRegion External IDIdentity
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 16/109 (15%)
YBR053CNP_009609.1 YvrE 1..345 CDD:225921 26/155 (17%)
WD40 repeat 150..186 CDD:293791
WD40 repeat 199..248 CDD:293791 8/35 (23%)
WD40 repeat 259..294 CDD:293791 8/58 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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