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Protein Alignment yellow-d2 and Rgn
DIOPT Version :9
Sequence 1: | NP_611788.1 |
Gene: | yellow-d2 / 37704 |
FlyBaseID: | FBgn0034856 |
Length: | 412 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033086.1 |
Gene: | Rgn / 19733 |
MGIID: | 108024 |
Length: | 299 |
Species: | Mus musculus |
Alignment Length: | 186 |
Identity: | 35/186 - (18%) |
Similarity: | 63/186 - (33%) |
Gaps: | 42/186 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 161 GKVAHQYKMPKRLYKEGVSRFVTPTVELDPHNCDVGFVYMADSIGDGIVVYDVAAQQSWRIENKF 225
|||. |...|..|.....|....|:.|...:..::...|:.......|::....|.:::|.
Mouse 105 GKVD-----PAGRYFAGTMAEETAPAVLERHQGSLYSLFPDHSVKKYFDQVDISNGLDWSLDHKI 164
Fly 226 TYPHPDFGTFTIAGESFQLWDGTVSTTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNGSNW-- 288
.| :.|..::|:....:.|..|.:| .||::| .:..:.|:...:.:...|..|
Mouse 165 FY-YIDSLSYTVDAFDYDLQTGQIS---------NRRIVY--KMEKDEQIPDGMCIDAEGKLWVA 217
Fly 289 ----------------RLNDVSAALDQFQLL---GKRGSQ----CVAAAMSESGFL 321
||..|...:|:.... ||..|: |....::..|.|
Mouse 218 CYNGGRVIRLDPETGKRLQTVKLPVDKTTSCCFGGKDYSEMYVTCARDGLNAEGLL 273
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
yellow-d2 | NP_611788.1 |
MRJP |
122..411 |
CDD:281074 |
35/186 (19%) |
Rgn | NP_033086.1 |
SGL |
16..264 |
CDD:400653 |
33/175 (19%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG3386 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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