DRSC/TRiP Functional Genomics Resources

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Protein Alignment: yellow-d and rgn

Sequence 1:NP_523820.2 Gene:yellow-d FlyBaseID:FBgn0041712 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001006822.1 Gene:rgn XenbaseID:XB-GENE-483637 Length:299 Species:Xenopus tropicalis

Alignment Length:171 Identity:35/172 (20%)
Similarity:57/172 (33%) Gaps:65/172 (38%)


  Fly   241 MYPDPDYGKHTIAGESFYLMDGMFALNN------DKRNLYFHPLAS----ASEYSVPL-SALNR- 293
            :|||....||      |.::|    ::|      |.:.||:....|    |.:|.:.. .:.|| 
 Frog   137 LYPDHSVVKH------FDMVD----ISNGLDWSLDHKTLYYIDSLSFKVDALDYDMKTGKSSNRR 191

  Fly   294 -----QQNWANGPEALPEEFRLLGRRRSECAASAIDGRNNVYCVTFNPVKLF---------VWNV 344
                 ||:     |.:|:             ...||....::...:|..::.         :..|
 Frog   192 TLYKLQQD-----EGIPD-------------GMCIDAEGKLWVACYNGGRVIRIDPETGKQIQTV 238

  Fly   345 NSPYNSRN---FGNLPAKSDDLQFVSGMKVLRNREGQEELW 382
            ..|.:...   ||. |..|:       |.|....||.:|.|
 Frog   239 KLPVDKTTSCCFGG-PDYSE-------MYVTSACEGMDEEW 271

Known Domains:


GeneSequenceDomainRegion External IDIdentity
yellow-dNP_523820.2 MRJP 133..413 CDD:281074 35/172 (20%)
rgnNP_001006822.1 SGL 17..263 CDD:312077 31/162 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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