DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Golgin245 and golg-4

DIOPT Version :10

Sequence 1:NP_611787.2 Gene:Golgin245 / 37702 FlyBaseID:FBgn0034854 Length:1489 Species:Drosophila melanogaster
Sequence 2:NP_001355507.1 Gene:golg-4 / 175445 WormBaseID:WBGene00010306 Length:1642 Species:Caenorhabditis elegans


Alignment Length:1762 Identity:401/1762 - (22%)
Similarity:744/1762 - (42%) Gaps:415/1762 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFANLKNKLI--------------EEVKASPSKFQQFANAAQAAVSSSSS-----TTPNSETNTS 46
            ||.||||:|.              |::.|...:::|..|...|...:|:|     |..:.||...
 Worm     1 MFKNLKNRLDNEAGKLKQSAQQYGEQLAAQVGQYRQAMNEQPAGSDASASISKRFTGESGETKAE 65

  Fly    47 NNENFFSITEEDTPQNSPYRIQKLPATSASALRGRSTQSLNGATSRTRKL-------SNSSMASD 104
            |..|       .:.::|...:.::|......|...||:|   .::|.|:.       ||.|..:.
 Worm    66 NPAN-------TSIESSSAIMSEIPEADLLGLGLSSTES---PSNRRRRSPSEDSIHSNESTLAA 120

  Fly   105 VSFRLPTYEAPAVYHLQSDLDETSSEFDDSASTARLDVITKDQLYDAYKKSLDRYHKYRCRYTDL 169
            :...:|...:.|:..:.||.:..:|:    |.:.|   .|.|..|::..|  .|...|:.:|.|.
 Worm   121 LLQSIPNAISSALETIPSDSESVASD----AFSVR---STNDPAYNSRLK--QRLATYKAKYRDA 176

  Fly   170 AKKYKELERDSSKARSVLVETQDKALRRISELREQCTLEQQAKAHL----------EEALRVEMD 224
            ..::.:|..|.:..|.:|..|||:.|:::.:||    ||::..|..          :|.|..:.:
 Worm   177 VHRHNKLVDDVNTTRKLLETTQDECLQKVEKLR----LEKRILAEKLSNSAGNGDGKEELEKKCE 237

  Fly   225 DMSCKMQAYQTKLQLLGENPENITAALERSGQQLESEQLIDLEESIGKSPLSTNGSSGVSDLQRL 289
            |....::..:.|::.|.::.:             |.:|||.::......|              .
 Worm   238 DYKRMLEQCKIKIKSLQQDKK-------------EQQQLITVDNDDSVDP--------------R 275

  Fly   290 LKERDEQLKSVTEKY-EAVRKQEEENVLLLAQTKQAIHTELELKDTEVRKLQEKLKQLESQRESH 353
            ::|.:::::...|:: ..:.:.::::.:.||.||..:|..||.||:|:.:.:.|...||.|....
 Worm   276 IREMEQRIQKTEEEWTNRINESDQQHAINLATTKAEMHAALENKDSEIEQWRRKCATLEQQDADA 340

  Fly   354 NNEVKEQFKKLQATKQEVDAKLMATEHLLNTLKESYAIKEQQVVTLEAQLEAIRVENEQKVKDLQ 418
            |....::.:|:||..:.::::   ...::..|.|:   |.|.|       :|:..|.|:|     
 Worm   341 NQRWSDKVEKVQAMNKALESE---KNEMIEKLSEA---KAQGV-------KAVLEEEERK----- 387

  Fly   419 KQNEDRNTQASDSSEQLKKLQAAVQDAESQLLSKDQLLESLRSEQAAKEQQ-LKHLKEQLGKLKQ 482
                 |....:|.::::::|:...:....::.:....||:..|.:..:|:: ::.||.:|..:|.
 Worm   388 -----RTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKESREFDEEREDVEALKLELNAVKS 447

  Fly   483 ENENYLDKLRENKKSSDSQTNEAQDQQKKLQAAK--------------DEAESKLLATEELLHSL 533
            ..::...::.||..|.::..:||   :|.|.|||              ::.|.:..|:|   |..
 Worm   448 TRDDLESRITENSSSFENYRSEA---EKTLAAAKAQFEKMVSECDKWREKYEERAAASE---HIA 506

  Fly   534 RNDYKAQE-----------EKVALLED------KLKTLSKENDVNVEKLHHINEQREAQSTDSQQ 581
            ..:::.||           ||.||.|.      |.:...||.:..|::|..:.::...:....|.
 Worm   507 TVEFETQETDAHRILEFEAEKKALAEKCEELTLKFEQADKEKNEMVQQLSRLQQEMLEKCDALQA 571

  Fly   582 KINELRAAKDEAEAKLLSTEHSLNALQAALSAKEEQAASLEQSLNALKTESEHSLQDL------R 640
            ::||.:|.::|.:||..........:|..|   ||....||....|.:.|.|...::.      :
 Worm   572 EVNEAKALREEIQAKYDDVTQKAERIQGEL---EESKKVLESEKQAFENEKEQEREEQLAKAMEK 633

  Fly   641 LHNDQ--LLEIVQRHQQNDWEAQLARAREELAAIQSQRELHALELEKSLEMERE-SVAALNSEKA 702
            |:::|  |.|:.::.:|::.|...||     .|||   ||    .||..|.|:| |.|....|..
 Worm   634 LNSEQNILDEVTKKLEQSEEEVLAAR-----GAIQ---EL----TEKLEESEKETSTAKTELEAV 686

  Fly   703 SQE-EQHRLKLEQLQREIQILQDQHANSE---SETVAALKGQLEALSQDLA----TSQASLLAKE 759
            |:: :.....|::....|:.::.|..|.|   .|.|..||.:||.:.::::    ..|..|.:..
 Worm   687 SKKLDSSETSLKEFSDMIEAMKIQLINCEKQKDEAVELLKQKLEEVEKNMSDVEVQKQLLLESTT 751

  Fly   760 KELKASGNKLNKIKKQHEQHQA------KSSDQSARLE-ALQSELADRLSH-SRQVESEKEELQA 816
            .|:|........:|||.|:.|:      |.::....|: ||:|:.:..:|. ::|:|:.|:||:|
 Worm   752 SEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEA 816

  Fly   817 RVTGILEEIGTMQAQMQQVQDSHSELEREKRKLESRIESLQQEQVDSSAQDERTSAKLEEIQSEN 881
            ..    :|...::.||.::|..|:..:.:.:||:...| |:..::..|.:||:.:.:....:.||
 Worm   817 SE----KEKSELREQMDRLQKVHNAGQEDIQKLQKTWE-LEMAKIAKSTEDEKLAREQLAGELEN 876

  Fly   882 TKL----------------------AERNC-LLEEQTNHLESQLQAKQDEIGKIQAKLQQVLDEH 923
            .|.                      ||:.. :|:||....:|.|::.| |:...| |..::.:..
 Worm   877 AKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSALESSQ-ELASSQ-KADKIQELE 939

  Fly   924 SKLQNAQELMDHDHRTLQDKCDAYEKDKLLTKHTLDCLQSASEELHRVKANLDRELK-------- 980
            .:|||||:      |:.::...|.|..:.||. ||:...|.:|.|.:....||:||:        
 Worm   940 KELQNAQK------RSSEELETANEMVRSLTA-TLENSNSETEILKQKLETLDKELQARQQTEKA 997

  Fly   981 -------------EQDQQLSELRERQREQEQQLKDQAERCAKLKAQ-------NSESETQLQATI 1025
                         |::||.::::..|.:..|...::.|:...:|.|       :|.:|..|:|.|
 Worm   998 LTEEINVLTTSLAEKEQQTAQIQNLQTQIYQMEVEKEEKVELVKVQLQQAAQSSSSAEEALRAEI 1062

  Fly  1026 SNLREQLDAYKQTEQGIQEKLQATNSSYTTQIATL----EARWSAANSDVERLHEAN----DALQ 1082
            ..|..:|.|.:|.:......|.|.......|:..|    |.:.......:::..:::    .||:
 Worm  1063 EQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAAQSSSSVEQALR 1127

  Fly  1083 LEMEQLKIKHGQEREEVKE-----SIAQKNRQVVELQEAMATRDR--------------QLQEKI 1128
            .|:|:|:.|. ||.||.|:     |:|:|.:|..::||..|...:              |||:..
 Worm  1128 AEIEKLEAKL-QEIEEEKKNALNASLAEKEQQTAQIQELQAQLHQLEVEKEEKLEMVKVQLQQAA 1191

  Fly  1129 EAS-----------EKL-AKFDEILIENEYLNKHTKQLEAELAESAELKEK-------------- 1167
            ::|           ||| ||..|  ||...:...:|: |.::.|.:.|.||              
 Worm  1192 QSSSSVEQALRAEIEKLEAKLQE--IEKAKMQNSSKR-EQKVRELSNLNEKMRVEFIAKEKIISD 1253

  Fly  1168 ----LKSLQCELYVLQEKAEQHAVQMAEKETQSATATAEVSELKKAIEEQAVELTRQKE------ 1222
                |.::..||.|.:...|:..:...|.||:...|||:....|  :||..:..|..||      
 Worm  1254 LRSELSTISTELVVQKATVEKTKMDFGELETREKRATADRENEK--MEEIRLRETFAKELETMGS 1316

  Fly  1223 ----HASFVTEQSDAVQKDLLQAQQQLHDKQIELAMSRDEQA-----LLQAEADGLRQEVICLKE 1278
                ..:...|...:.:|.:.:...|..:|..:...|:||.:     .|:|.|:..:.|      
 Worm  1317 ALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLE------ 1375

  Fly  1279 HLSPSTDSDSLRSLNERL---QRELEDLKHKSAGAE---SNMQQEIEELQANNQQMAERINELET 1337
                  ....||:|.|.|   :.|:|:||.|...||   |:.:.|.|.|:...:::.:||..||.
 Worm  1376 ------SEQKLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEA 1434

  Fly  1338 LRAGIQAQQLLASMAPKNVQ-EAAAAGEKAELESKLKEIMNEVQDVTNRNLFLEQKCENFLILEQ 1401
                 :.::|.|:...|.|: :..|.....||:.::|::.||:.|   :|...:...|....|:.
 Worm  1435 -----EVKKLTAANETKAVKADTDARKVVRELQKEVKQLYNELND---KNQQFDMVQEELTRLKT 1491

  Fly  1402 SNE-----RLKLQN-----------------AKLSRQLDETLV---------------------- 1422
            |.|     :|::|.                 |.|.::||.:|.                      
 Worm  1492 SKETAENGQLQVQKQMDEEDRRSEFSFKEEIASLKQKLDASLTEADDLRMQVSRNEKTPRSNGNA 1556

  Fly  1423 ------SMQ-HSEAVPANTEFEYLRNIMFQYLTGNTN----NETLVKVISAVLKFSPQQAQVALE 1476
                  ||: |..|.||  |.|||||::::|:|...:    :.||.:||..|.:|...|.:..:.
 Worm  1557 STGRTKSMELHGIADPA--EAEYLRNVLYRYMTNRESLGKESVTLARVIGTVARFDESQMKNVIS 1619

  Fly  1477 KEHQRRS 1483
            .|..|::
 Worm  1620 SEESRQA 1626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin245NP_611787.2 Smc 286..>856 CDD:440809 144/627 (23%)
Smc 583..1247 CDD:440809 192/806 (24%)
MIT_CorA-like <1244..>1333 CDD:469776 26/99 (26%)
Grip 1433..1477 CDD:197860 15/47 (32%)
golg-4NP_001355507.1 PTZ00121 <261..1015 CDD:173412 186/825 (23%)
Smc <903..>1468 CDD:440809 143/596 (24%)
Grip 1572..1620 CDD:197860 17/49 (35%)

Return to query results.
Submit another query.