DRSC/TRiP Functional Genomics Resources

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Protein Alignment Golgin245 and Cenpf

DIOPT Version :10

Sequence 1:NP_611787.2 Gene:Golgin245 / 37702 FlyBaseID:FBgn0034854 Length:1489 Species:Drosophila melanogaster
Sequence 2:NP_001074832.2 Gene:Cenpf / 108000 MGIID:1313302 Length:2997 Species:Mus musculus


Alignment Length:1774 Identity:382/1774 - (21%)
Similarity:697/1774 - (39%) Gaps:467/1774 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLKNKLIEEVKASPSKFQQ-------FAN------------AAQAAVSSSSSTTPNSETNTSN-N 48
            |.||:| |::|.:.:|.||       ||.            ..|...|..::|..:|.:.|.. .
Mouse  1072 NRKNEL-EQLKETFAKEQQEFLTKLAFAEEQNRKLMLELEIEQQTVRSEITNTNKHSMSATDGLR 1135

  Fly    49 ENFFSITEEDTPQNSPYRIQKLPATSASALRGRSTQSLNGATSRTRKLSNSSMASDVSFRLPTYE 113
            :...::.||...|.:                     .::..|....:|...:.....|:.     
Mouse  1136 QECLTLNEEQNEQQN---------------------EVSNLTHENEQLMELTQTKHDSYL----- 1174

  Fly   114 APAVYHLQSDLDETSSEFDDSASTARLDVITKDQLYDAYKK--------------SLDRYHKYRC 164
              ||..:::.:..|..|...|:|..::|:.|||...|:||.              .||:..:...
Mouse  1175 --AVEPVENSVKATEDEIGKSSSQYQMDIDTKDISLDSYKAQLVHLEALVRILEVQLDQSEEENK 1237

  Fly   165 R-YTDLAKKYKELERDS-----SKARSVLVETQDKALRRISELREQCTLEQQAKAHLEEALRVEM 223
            : :.:|....:|||..|     |:||:.|.:. |.|..:...:.::.:..|...|||:       
Mouse  1238 KLHLELQTIREELETKSSQDPQSQARTGLKDC-DTAEEKYVSMLQELSASQNENAHLQ------- 1294

  Fly   224 DDMSCKMQAYQTKLQLLGENPENITAALERSGQQLESEQLIDLEESIGKSPLSTNGSSGVSDLQR 288
                |.:|....||..||:    :...|.....|||||    |.:|  ::...|..|...:::::
Mouse  1295 ----CSLQTAVNKLNELGK----MCDVLRVEKLQLESE----LNDS--RTECITATSQMTAEVEK 1345

  Fly   289 LLKE-----------RDEQLKSVTEKYEAVRKQEEENVLLLAQTKQAIHTELELKDTEVR----K 338
            |:.|           ::|.:|. |...|...|....:|.|..........::.|...|||    :
Mouse  1346 LVSEMKMLNHESALSQNELMKD-TSGGEFHDKANHSSVFLTPLDSSNFCEQMTLSSKEVRVHFAE 1409

  Fly   339 LQEKLKQLESQRESHNNEVKEQFKKLQATKQEVDAKLMATEHLLNTLKESYAIKEQQVVTLEAQL 403
            ||||...|:|:.           |.|.....||.:|:.|....::|||...:.....:.||:..|
Mouse  1410 LQEKFSCLQSEH-----------KILHDQHCEVSSKMSALRSYVDTLKAENSALSMSLRTLQGDL 1463

  Fly   404 EAIRVENEQKV---------------------------KDLQKQNEDR-------NTQA------ 428
            ..   |.|...                           ||:.:|..|.       |..|      
Mouse  1464 VK---EGEPAAEGGHGLPLSFCGADSPSLTNFGETSFYKDVLEQTGDTCHLSLEGNASANSCDLD 1525

  Fly   429 ---SDSSEQ--------------------------LKKLQAAVQDAESQLLSKDQLLESLRSEQA 464
               |.|.|:                          |:.|:...:..|||.:.|::.:|.|....:
Mouse  1526 EEFSSSLEEETLTEKESPPAPGRTVEGLEVLCQVYLQSLKNLEEKTESQRIMKNKEIEKLEQLLS 1590

  Fly   465 AKEQQLKHLKEQLGKLKQENENYLDKLRENKKSSDSQTNEAQDQQK----KLQAAK------DEA 519
            ::.::|..|::|   ...|.|.:..||.......:|:..|.:.|.|    :|:.|:      |.:
Mouse  1591 SERKELSCLRKQ---YLSEKEQWQQKLTSVTLEMESKLAEEKQQTKTLSLELEVARLQLQELDLS 1652

  Fly   520 ESKLLAT--EELLHSLRNDYKAQEEKVALLEDKLKTLSKENDVNVEKLHHINEQREAQSTDSQQK 582
            ...||.|  |.::....::|..:|.:|.:.|...||..::.|...:|             |.||.
Mouse  1653 SRSLLGTDLESVVRCQNDNYDIKESEVYISETTEKTPKQDTDQTCDK-------------DIQQD 1704

  Fly   583 INELRAAKDEAEAKLLSTE------HSLNALQAALSAK----EEQAASLEQSLNAL----KTESE 633
            :. |..:..|:|...|:.|      ...|. :|....|    .|..:.|..|.|.|    ..|.:
Mouse  1705 LG-LETSVTESETTRLTGEGCEEQPPKTNC-EAPAEDKTQDCSECISELCSSSNVLVPMDVLEDQ 1767

  Fly   634 HSLQDLRLHNDQLLEIVQ-RHQQNDWEAQLARAREELAAIQSQRELHALELEKS----LEMERES 693
            .|:|:|:|..|.|.|.:: ..:..||:.::.....|:....|:..|..::|:..    :::|: .
Mouse  1768 GSIQNLQLQKDTLNENLRLLPEVEDWDKKVESLLNEIMEADSKLSLQEVQLKMKIATCIQLEK-I 1831

  Fly   694 VAALNSEKASQEEQHR---------LKLEQLQREIQILQDQHANSESETVAALKGQLEALSQDLA 749
            |..|..|||...|:..         |::|:.:.::....|..||.          .|...::|.|
Mouse  1832 VKDLRKEKADLSEKLESLPCNQEVCLRVERSEEDLGFNLDMGANE----------LLSKSTKDNA 1886

  Fly   750 TSQASLLAKEKELKASGNKLNKIK--KQHEQHQAKSSDQSARLEALQSELADRLSHSRQVESEKE 812
            |:..... |||.|... .:|.:||  |.:.:|...|.:  ..||.:|   |::|...|..||:::
Mouse  1887 TNTEDNY-KEKFLDME-RELTRIKSEKANIEHHILSVE--TNLEVVQ---AEKLCLERDTESKQK 1944

  Fly   813 ---ELQARVTGILEEIGTMQAQMQQVQDSHSELEREKRKLESRIESLQQEQVDS----SAQDERT 870
               :|:..:..::.|...::.::..|......|::..:|::.:||.|:..|.:|    .|.:...
Mouse  1945 VIIDLKEELFTVISERNRLREELDNVSKESKALDQMSKKMKEKIEELESHQRESLRHIGAVESEV 2009

  Fly   871 SAKLEEIQSENTKLAERNCLLEEQTNHLESQLQAKQDE-------IGKIQAKLQQVLDEHSKLQN 928
            ..|.:.||:.:..:.|    |.:...||:.|||..|::       ||:::.::.|:..|...|  
Mouse  2010 KDKADLIQTLSFNVGE----LTKDKAHLQEQLQNLQNDSQELSLAIGELEIQIGQLNKEKESL-- 2068

  Fly   929 AQELMDHDHRTLQDKCDAY-----------EKDKLLTKHTLDCLQSASEELHRVKANLDR----- 977
            .:|..:...:..:.:|:..           ||.:...:     |.||.||:|:::..:::     
Mouse  2069 VKESQNFQIKLTESECEKQTISKALEVALKEKGEFAVQ-----LSSAQEEVHQLRRGIEKLSVRI 2128

  Fly   978 --ELKEQDQQLSELRERQREQEQQLKDQAERCAKLKAQNSESE-------TQLQATISNLREQLD 1033
              :.|:....:::|:|.|||.: .|||..|...:...::.|::       ..|:|.:..|:.|.|
Mouse  2129 EADEKKHLSAVAKLKESQRESD-SLKDTVETLERELERSEENQELAILDSENLKAEVETLKAQKD 2192

  Fly  1034 --------------AYKQTEQGIQEKLQATNSSYTTQIATLEARWSAANSDVERLHEANDALQLE 1084
                          ..:...:.:.::||...|    :::.|:.|.|:    :.||.|..:..:::
Mouse  2193 EMTKSLRIFELDLVTVRTERENLAKQLQEKQS----RVSELDERCSS----LRRLLEEKEQARVQ 2249

  Fly  1085 MEQ--------LKIKHGQEREEV-------------KESIAQKNRQVVELQEAMATRDRQLQEKI 1128
            ||:        |:::..:.||||             ::|:.|...:|..|:.::    |:|:..|
Mouse  2250 MEEDSKSAMLMLQMQLKELREEVAALCNDQETLKAQEQSLDQPGEEVHHLKSSI----RKLKVHI 2310

  Fly  1129 EASEKLAKFDEILIENEYLNKHTKQLEAELAESAE----LKEKLKSLQCELYVLQEKAEQHAVQM 1189
            :|.||               ||...|| :|.||..    ||:::::|:.|| :|.||   :.:..
Mouse  2311 DADEK---------------KHQNILE-QLKESKHHADLLKDRVENLEQEL-ILSEK---NMIFQ 2355

  Fly  1190 AEKETQSATATAEVSELKKAIEEQAVELTRQKEHASFVTEQSDAVQKDLLQAQQQ---------- 1244
            |||      :.||:..||..|:..|..|...:........:::.:.|:|.:.|::          
Mouse  2356 AEK------SKAEIQTLKSEIQRMAQNLQDLQLELISTRSENENLMKELKKEQERVSDLETINSS 2414

  Fly  1245 ----LHDKQIELAMSRDEQ----ALLQAEADGLRQEVI--CLKEHLSPSTDSDSLRSLNERLQRE 1299
                |.||:.|....::|.    .:||.:...|.:.|:  |..:.:| .|...:|.|..:.|:.|
Mouse  2415 IENLLKDKEQEKVQMKEEAKITVEMLQTQLKELNETVVSLCNDQEVS-KTKEQNLGSQVQTLELE 2478

  Fly  1300 ----LEDL---KHKSAGAESNMQQEIEELQANNQQMAERINELETLRAGIQAQ-QLLASMAPKNV 1356
                |:||   |:|....:|::....:|::|..|::.:...|:.||:..:::| ||:..:|....
Mouse  2479 KAQLLQDLGEAKNKYIIFQSSVNALTQEVEAGKQKLEKGEKEIRTLKEQLKSQEQLVCKLAQVEG 2543

  Fly  1357 QEAAAAGEKAELESKLKEIMNEVQDVTNRNLFLEQKCENFLILEQSNERLK-----LQNAKLSRQ 1416
            ::.....:|.||.              |..:.||||.:   :|:..|..|:     |||:..|.:
Mouse  2544 EQQLWQKQKLELR--------------NVTMALEQKVQ---VLQSENNTLQSTYEALQNSHKSLE 2591

  Fly  1417 LDETLVSMQHSEAVP-----ANTEFEYLRNI--MFQYLTG-----NTNNETLVKVISAVLKFSPQ 1469
            .:..|:.::....|.     :..|.|..|.:  |.|..|.     |.....|.:.:. ||:...|
Mouse  2592 SELGLIKLEKVALVERVSTISGKEAELQRELRDMLQKTTQLSEDYNKEKNRLTEEVE-VLREELQ 2655

  Fly  1470 QAQVA-------LEKEHQR 1481
            ..:.|       ||||.||
Mouse  2656 NTKAAHLKSVNQLEKELQR 2674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Golgin245NP_611787.2 Smc 286..>856 CDD:440809 147/698 (21%)
Smc 583..1247 CDD:440809 169/785 (22%)
MIT_CorA-like <1244..>1333 CDD:469776 25/115 (22%)
Grip 1433..1477 CDD:197860 13/57 (23%)
CenpfNP_001074832.2 CENP-F_N 1..300 CDD:463106
SMC_prok_B 290..1122 CDD:274008 13/50 (26%)
SMC_prok_B <1550..2248 CDD:274008 160/753 (21%)
SMC_prok_B <1959..2746 CDD:274008 173/785 (22%)
CENP-F_leu_zip 2131..2270 CDD:463102 28/147 (19%)
CENP-F_leu_zip 2313..2449 CDD:463102 38/161 (24%)
CENP-F_C_Rb_bdg 2850..2896 CDD:463111
Blue background indicates that the domain is not in the aligned region.

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