DRSC/TRiP Functional Genomics Resources

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Protein Alignment yip3 and PUP1

DIOPT Version :10

Sequence 1:NP_523819.2 Gene:yip3 / 37683 FlyBaseID:FBgn0040063 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_014800.3 Gene:PUP1 / 854328 SGDID:S000005683 Length:261 Species:Saccharomyces cerevisiae


Alignment Length:183 Identity:43/183 - (23%)
Similarity:79/183 - (43%) Gaps:25/183 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IVGLKSTNAVILATDSKEYE-----------MYLIDDRIYCCAPRSGIDRNIVLEV---SSKVAN 64
            |||:|..|.|::|.|::..:           ::.|..:|:|....:..|...|.::   :.::.:
Yeast    32 IVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHS 96

  Fly    65 LVRDRGQN-VTVSQVRDMFCEKYQTAESPNVMIAGQDSRGLHLFSMEC-GKSRMVMYGAKGRDKE 127
            |...|... |:..|:......|||......:::||.|..|.||||:.. |.:.:..|.:.|....
Yeast    97 LYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSL 161

  Fly   128 NIVDFLSKDWNDFINLSEAEQLARKALR---W------EHVEMCTIYRAKEIE 171
            ..:..|...|...:...||.:||..|::   |      .:|::|.:...|:.|
Yeast   162 AAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAE 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yip3NP_523819.2 Ntn_hydrolase 14..155 CDD:469781 38/156 (24%)
PUP1NP_014800.3 proteasome_beta_type_7 30..219 CDD:239732 43/183 (23%)
Pr_beta_C 222..257 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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