DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klp59C and RGD1559908

DIOPT Version :9

Sequence 1:NP_611759.1 Gene:Klp59C / 37671 FlyBaseID:FBgn0034824 Length:626 Species:Drosophila melanogaster
Sequence 2:XP_038952347.1 Gene:RGD1559908 / 364670 RGDID:1559908 Length:557 Species:Rattus norvegicus


Alignment Length:563 Identity:283/563 - (50%)
Similarity:362/563 - (64%) Gaps:39/563 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KLSIEQKIFIRRSDGRVHLAEIIKLEGGDSKLITVEWPEGHTVRGKELPLELVVLMNPHIFDSPR 67
            |:.|...:.|:|||||:|.|.:..| ..|::.:||||.|....:|||:.||.:..:||.:.....
  Rat     8 KIQIGIYVEIKRSDGRIHQAMVTSL-NEDNESVTVEWIENGDTKGKEIDLESIFSLNPDLVPDED 71

  Fly    68 CSGGNAASANQTASISPRSMKQRIATGSLSPVLATAPPR----------------------QQTA 110
            ...........::|...:.:|.|....|:.   ...|||                      ||.|
  Rat    72 IEPSPEIPPPSSSSKVNKIVKNRRTVASIK---NDPPPRDNRVVGSARARPSQLPEQSSSAQQNA 133

  Fly   111 PPVREDEVVHQAERMRKERERRREAQARTRLDREQGKNEDPGNPNWEVARMIRLQREQMESQRVR 175
            .  |:...|.:.|:::::||:||..|...|..|.|  :.|..|||:|:..|||..|..::   .|
  Rat   134 R--RKSNCVKEVEKLQEKREKRRLQQQELREKRAQ--DVDATNPNYEIMCMIRDFRGSLD---YR 191

  Fly   176 SGTTNERINCHQIMVCVRKRPLRRKELADREQDVVSIPSKHTLVVHEPRKHVNLVKFLENHSFRF 240
            ..||.:.|:.|:|.||||||||.:||...::.||::||||..::||||::.|:|.::|||.:|||
  Rat   192 PLTTADPIDEHRICVCVRKRPLNKKETQMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRF 256

  Fly   241 DYVFDEECSNATVYEFTARPLIKHIFDGGMATCFAYGQTGSGKTYTMGGQFPGRHQSSMDGIYAM 305
            ||.||:...|..||.||||||::.||:.||||||||||||||||:||||.|.|::|....||||:
  Rat   257 DYAFDDSAPNEMVYRFTARPLVETIFERGMATCFAYGQTGSGKTHTMGGDFSGKNQDCSKGIYAL 321

  Fly   306 AAKDVFSTLKTVPYNKLNLKVYCSFFEIYGTRVFDLLMPGKPQLRVLEDRNQQVQVVGLTQNPVQ 370
            ||:|||..||...|.||.|:||.:|||||..:||||| ..|.:||||||..||||||||.:..|:
  Rat   322 AARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLL-NRKTKLRVLEDGKQQVQVVGLQEREVK 385

  Fly   371 NTAEVLDLLELGNSVRTSGHTSANSKSSRSHAVFQIVLRSAAGEKLHGKFSLIDLAGNERGADNS 435
            ...:||.|:::|||.||||.||||:.||||||||||:||...  |||||||||||||||||||.|
  Rat   386 YVEDVLKLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKG--KLHGKFSLIDLAGNERGADMS 448

  Fly   436 SADRQTRLEGSEINKSLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISP 500
            ||||||||||:|||||||.||||||||||...|.|||.|||||||||||| |:..:|||||.|||
  Rat   449 SADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFI-GENSRTCMIATISP 512

  Fly   501 CLHSVEHTLNTLRYADRVKELSVESIPSKRMPDANLGSTSMSD 543
            .:.|.|:||||||||:|.:  |...|.:.:..:|..|..:..|
  Rat   513 GMASCENTLNTLRYANRYE--SDSYILNLKSREARHGVVAFDD 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klp59CNP_611759.1 KISc_KIF2_like 187..519 CDD:276818 219/331 (66%)
Kinesin 193..520 CDD:278646 215/326 (66%)
RGD1559908XP_038952347.1 KISc_KIF2_like 203..529 CDD:276818 218/329 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202066at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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