DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3700 and psh

DIOPT Version :10

Sequence 1:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:414 Identity:116/414 - (28%)
Similarity:170/414 - (41%) Gaps:91/414 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPGIQILLLIASV-SVVT-----EYCDNGTGECKELTPSDCPVIFYNQHLIGA----EVKYC--D 56
            |.|..:|:..:|| :.||     :..|...|.|:  |.|||..:.......|.    :|..|  .
  Fly     8 LLGTFVLISCSSVEAAVTVGRACKVTDTMPGICR--TSSDCEPLIDGYIKSGVLTLNDVPSCGLG 70

  Fly    57 EFNDIVCCPIP--LDHQNLKPAEQT-----------------------RPFEKQCKQYNE---VR 93
            .:.:|.|||..  .|:..:.....:                       ||....||:..|   .|
  Fly    71 AWGEIFCCPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKKIRERKQQR 135

  Fly    94 SACQSTPFIVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESK 158
            |..|....||||.......:|.||.||     ......::.||||::..:||||||||:.||.  
  Fly   136 SGNQLVIHIVGGYPVDPGVYPHMAAIG-----YITFGTDFRCGGSLIASRFVLTAAHCVNTDA-- 193

  Fly   159 AERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFK-NDIALVELD 222
                    ::|.| ||||.:  |....|...||..:.:..:||.|      .|.| ||||::||:
  Fly   194 --------NTPAF-VRLGAV--NIENPDHSYQDIVIRSVKIHPQY------VGNKYNDIAILELE 241

  Fly   223 RKAEFNDHVAAVCL------PPDSGNDVQQVTAAGWGF--TADGVKSSHLLKVNLQRFSDEVCQ- 278
            |.....|::...||      ||.:    .:...||||.  .....:|..||:..|:....:.|. 
  Fly   242 RDVVETDNIRPACLHTDATDPPSN----SKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNI 302

  Fly   279 ---------KRLRFSIDTRTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQVIGIVSYGLVC 334
                     :.|:..: ..:..||......||.|.||||||:..:..:...:..::|::|.|..|
  Fly   303 SYAEQPGSIRLLKQGV-IDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGC 366

  Fly   335 GSQGLPSVYTKVHLYTDWIESIVW 358
            .:. .|.:||:|..|.|:||.|||
  Fly   367 ATV-TPGLYTRVSSYLDFIEGIVW 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 83/272 (31%)
pshNP_573297.1 CLIP 30..79 CDD:197829 12/50 (24%)
Tryp_SPc 144..387 CDD:238113 83/272 (31%)

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