DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG3700 and psh

Sequence 1:NP_611736.1 Gene:CG3700 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster

Alignment Length:414 Identity:116/415 (28%)
Similarity:170/415 (41%) Gaps:91/415 (22%)


  Fly     4 LPGIQILLLIASV-SVVT-----EYCDNGTGECKELTPSDCPVIFYNQHLIGA----EVKYC--D 56
            |.|..:|:..:|| :.||     :..|...|.|:  |.|||..:.......|.    :|..|  .
  Fly     8 LLGTFVLISCSSVEAAVTVGRACKVTDTMPGICR--TSSDCEPLIDGYIKSGVLTLNDVPSCGLG 70

  Fly    57 EFNDIVCCPIP--LDHQNLKPAEQT-----------------------RPFEKQCKQYNE---VR 93
            .:.:|.|||..  .|:..:.....:                       ||....||:..|   .|
  Fly    71 AWGEIFCCPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKKIRERKQQR 135

  Fly    94 SACQSTPFIVGGTKASGKEFPFMALIGTHRPNKSKSDINWDCGGSVVHPKFVLTAAHCLETDESK 158
            |..|....||||.......:|.||.||     ......::.||||::..:||||||||:.||.  
  Fly   136 SGNQLVIHIVGGYPVDPGVYPHMAAIG-----YITFGTDFRCGGSLIASRFVLTAAHCVNTDA-- 193

  Fly   159 AERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRVVNYVVHPGYDTEDEEQGFK-NDIALVELD 222
                    ::|.| ||||.:  |....|...||..:.:..:||.|      .|.| ||||::||:
  Fly   194 --------NTPAF-VRLGAV--NIENPDHSYQDIVIRSVKIHPQY------VGNKYNDIAILELE 241

  Fly   223 RKAEFNDHVAAVCL------PPDSGNDVQQVTAAGWGF--TADGVKSSHLLKVNLQRFSDEVCQ- 278
            |.....|::...||      ||.:    .:...||||.  .....:|..||:..|:....:.|. 
  Fly   242 RDVVETDNIRPACLHTDATDPPSN----SKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNI 302

  Fly   279 ---------KRLRFSIDTRTQFCAGSMSSQADTCNGDSGGPIFVQHPLYPCLKQVIGIVSYGLVC 334
                     :.|:..: ..:..||......||.|.||||||:..:..:...:..::|::|.|..|
  Fly   303 SYAEQPGSIRLLKQGV-IDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGC 366

  Fly   335 GSQGLPSVYTKVHLYTDWIESIVW 358
            .:. .|.:||:|..|.|:||.|||
  Fly   367 ATV-TPGLYTRVSSYLDFIEGIVW 389

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 83/273 (30%)
Tryp_SPc 102..353 CDD:214473 81/270 (30%)
pshNP_573297.1 CLIP 30..79 CDD:197829 13/51 (25%)
Tryp_SPc 143..384 CDD:214473 81/271 (30%)
Tryp_SPc 144..387 CDD:238113 83/273 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 1 1.010 D476534at33208
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
11.010

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