DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and CYCB2;3

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_173485.1 Gene:CYCB2;3 / 838650 AraportID:AT1G20610 Length:429 Species:Arabidopsis thaliana


Alignment Length:436 Identity:132/436 - (30%)
Similarity:214/436 - (49%) Gaps:43/436 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SAFLRSNSVRNRVPTKTTVEPTK---------VTVKSSSSENVNEPTLKREDSNLSKKSL----- 158
            |..|:...|..::.|..|..||:         :|...|....||:.::...|...:|..:     
plant    14 SMSLQGGGVVGKIKTTATTGPTRRALSTINKNITEAPSYPYAVNKRSVSERDGICNKPPVHRPVT 78

  Fly   159 TKLRAALA--KPVMGVSGIR----REPVAVSRKEAET-KKELPETKKDSLEVKKDATRMPLIRGN 216
            .|..|.||  ||     .||    ::|.:||.:|.|| ..::.|:.|:.    .|:.....::..
plant    79 RKFAAQLADHKP-----HIRDEETKKPDSVSSEEPETIIIDVDESDKEG----GDSNEPMFVQHT 134

  Fly   217 SAVTTTTSTMPTTMSL--SSKRLAGIEDIDANDKENLVLVSEYVNDIYDYLYQVELEQPIHKDHL 279
            .|:......|...:.:  :.|....:.||||.||.|.:...||::|::.:....|....:..:::
plant   135 EAMLEEIEQMEKEIEMEDADKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYM 199

  Fly   280 AGQKEVSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIA 344
            ..|::::.:||.:||||:.|||.:|.|..||..|.:.:|||:| .|....|..|||||||||.:|
plant   200 DNQQDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFL-AVHQIVRKKLQLVGVTALLLA 263

  Fly   345 TKYEELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAEDEHH 409
            .||||:..|.:.|.:.|:|..|:.|::..||..:...:..|.|.|.|..|::|:.|||.::.:..
plant   264 CKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLE 328

  Fly   410 TMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAH 474
            .:|.:.|||..|:|||..|.||::||::::.:...|.       ||.:  |:.|..|::.|:...
plant   329 ILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLK-------GFEE--WSKTCEFHTGYNEKQ 384

  Fly   475 LRPITRLIAKLARDAPQAKLKAIYNKYQGSKFQKIALRTELTGALM 520
            |....|.:......|...||..::.||..|||.. |.|||..|.|:
plant   385 LLACARKMVAFHHKAGTGKLTGVHRKYNTSKFCH-AARTEPAGFLI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 47/129 (36%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 37/119 (31%)
CYCB2;3NP_173485.1 CYCLIN_AtCycB-like_rpt1 157..303 CDD:410270 54/146 (37%)
CYCLIN_AtCycB-like_rpt2 308..424 CDD:410215 40/125 (32%)

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