DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and AT1G20590

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001319051.1 Gene:AT1G20590 / 838648 AraportID:AT1G20590 Length:265 Species:Arabidopsis thaliana


Alignment Length:180 Identity:62/180 - (34%)
Similarity:97/180 - (53%) Gaps:10/180 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 VAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQMELQIF 379
            :.:|||:| .|....|..|||||||||.:|.||||:..|.:.|.:.|:|..|:.|::..||..:.
plant    63 IFVIDRFL-AVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMA 126

  Fly   380 KAIDCNLSRPLPIHFLRRYSKAAGAEDEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHL 444
            ..:..|.|.|.|..|::|:.|||.::.:...:|.:.|||..|:|||..|.||::||::::.:...
plant   127 NTLQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCT 191

  Fly   445 LNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLARDAPQAKL 494
            |.       ||.:  |:.|..|::.|:...|....|.:......|...||
plant   192 LK-------GFEE--WSKTCEFHTGYNEEQLLACARKMVAFHHKAGTGKL 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 28/68 (41%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 32/106 (30%)
AT1G20590NP_001319051.1 CYCLIN_SF <63..131 CDD:477360 28/68 (41%)
CYCLIN_AtCycB-like_rpt2 136..250 CDD:410215 32/106 (30%)

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