DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and LOC105948063

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:XP_012824177.1 Gene:LOC105948063 / 105948063 XenbaseID:XB-GENE-29089835 Length:301 Species:Xenopus tropicalis


Alignment Length:332 Identity:73/332 - (21%)
Similarity:121/332 - (36%) Gaps:69/332 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 KKELPETKKDSLEVKKDATRMPLIRGNSAVTTTTSTMPTTMSLSSKRLAGIEDID-----ANDKE 249
            |::|.||.|                |....:|.:|      ..|:|:|.....:.     ..|..
 Frog     8 KRKLEETSK----------------GGEGRSTDSS------EASNKKLKYDHQVPRGPVYLKDPW 50

  Fly   250 N--------LVLVSEYVNDIYDY-LYQVELEQPIHKDHLAGQKEVSH-KMRAVLIDWINEVHLQF 304
            |        |.:.||:..:.|.: ..:.|...|:  :.|..|..:|. ...||....|| ||.::
 Frog    51 NSFGKIGKALKMFSEFGENGYQFDKSKEESFTPV--NFLDKQPNISETSWSAVTTQMIN-VHRKY 112

  Fly   305 HLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFV-FITDDTYTA 368
            ....||..|::.::.|:|... ..:...|:.||.|.|::|.|..|...|...:|: ..|:...|.
 Frog   113 GFDFETLCLSINMLQRFLDCT-PIEIANLKAVGATCLYVACKVVEKHQPEKQNFLNAFTNTGLTP 176

  Fly   369 RQIRQMELQIFKAIDCNLSRPLPIHFLRRYS--KAAGAEDEHHTM---------SKYFIELASVD 422
            ..:..:|..|.:.:...|..|....||..||  :.:..::.|..:         :|....|:...
 Frog   177 TLLYGLEKLILQQLQYRLWAPTINSFLEYYSLQRMSRNKNSHAHLTREVKTLLAAKAVAALSMTS 241

  Fly   423 YEMATYRPSEIAAASL-FLSLHLLNGNHRAGTGFNDRHWTPTLTFYSRYSAAHLRPITRLIAKLA 486
            |:...::||.:|.:.| ...|.:..|..:|.          .||...:.....|.|     |...
 Frog   242 YKAQAHKPSVMAQSCLKAADLLMQEGIEKAA----------PLTSLKKGFLYQLMP-----AVFK 291

  Fly   487 RDAPQAK 493
            |..||.|
 Frog   292 RPTPQQK 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 33/132 (25%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 25/117 (21%)
LOC105948063XP_012824177.1 CYCLIN_SF 105..190 CDD:477360 23/86 (27%)
CYCLIN_SF 197..>266 CDD:477360 14/68 (21%)

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