DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycB and ccni2

DIOPT Version :10

Sequence 1:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001096463.1 Gene:ccni2 / 100125081 XenbaseID:XB-GENE-5874358 Length:358 Species:Xenopus tropicalis


Alignment Length:196 Identity:47/196 - (23%)
Similarity:84/196 - (42%) Gaps:29/196 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   285 VSHKMRAVLIDWINEVHLQFHLAAETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIA--TKY 347
            ::|..:|:|  ||:||.|:|....|||.|||:|::|.|..|| .:..||:.:.||.||:|  |..
 Frog    44 LTHYEQAIL--WIDEVTLRFRFYPETFGLAVSILNRILASVK-VQVKYLRCITVTCLFLAAKTNE 105

  Fly   348 EELFPPAIGDFVFITDDTYTARQIRQMELQIFKAIDCNLSRPLPIHFLRRYSKAAGAE------- 405
            |:...|::......:....:..:|.:||..:...:..:|....|:.||..:.....:.       
 Frog   106 EDEIIPSVKRLAVQSGCMCSPAEILRMERIVLDKLQWDLCTATPVDFLNTFHAMLMSNLPHLFHD 170

  Fly   406 ------DEHHTMSKYFIELASVDYEMATYRPSEIAAASLFLSLHLLNGNHRAGTGFNDRHWTPTL 464
                  ..|..:....::.....:::..:|.|.:|...:.|.|..|..:           |.|.:
 Frog   171 CLRMNPSSHLALLTRQLQQCMACHQLVQFRGSTLALVIITLELEKLTAD-----------WFPAI 224

  Fly   465 T 465
            |
 Frog   225 T 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 33/100 (33%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 13/90 (14%)
ccni2NP_001096463.1 CYCLIN_CCNI-like 46..144 CDD:410230 33/100 (33%)

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