DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42260 and CNGC11

DIOPT Version :9

Sequence 1:	NP_001356969.1	Gene:	CG42260 / 37614	FlyBaseID:	FBgn0259145	Length:	1269	Species:	Drosophila melanogaster
Sequence 2:	NP_182167.2	Gene:	CNGC11 / 819252	AraportID:	AT2G46440	Length:	621	Species:	Arabidopsis thaliana

Alignment Length:	524	Identity:	111/524 - (21%)
Similarity:	213/524 - (40%)	Gaps:	103/524 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   586 VVSMA----FLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFRT--------GY 638
            ||::|    ||:...:...||.| ..::..:|:...:....|..|:|.|:::..|        ..
plant    49 VVALAIDPLFLFIPLIDSQRFCF-TFDKTLVAVVCVIRTFIDTFYVIHIIYYLITETIAPRSQAS 112

  Fly   639 LEDGVLQTDALKLRTHYMNSTIFYIDCLCLLP------LDFLYLSIGFNS-------ILRSF--R 688
            |...::......|:|..:..  |.:|.:.:||      |..:.||....|       ||..:  |
plant   113 LRGEIVVHSKATLKTRLLFH--FIVDIISVLPIPQVVVLTLIPLSASLVSERILKWIILSQYVPR 175

  Fly   689 LVKIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGC-----LYHIIHKNNGF------- 741
            ::::|..  :.:.|..........|..|.:::.|.:.|...|     |..|..|:..:
plant   176 IIRMYPL--YKEVTRAFGTVAESKRVGAALNFFLYMLHSYVCGAFWYLSSIERKSTCWRAACART 238

  Fly   742 ---------------GSRN------------------------WVYHDS--------ESADVVKQ 759
                           ||.|                        .:|.|:        :..|..::
plant   239 SDCNLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDFPRK 303

  Fly   760 YLQSYYWCTLALTTIG-DLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQA 823
            ::..::|....::.:| :|....|.||..|.|:..:.||:|||.::|:|...:.|.:....|.:.
plant   304 FVYCFWWGLRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTTRVDEMEE 368

  Fly   824 KLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRV 888
            |....:.:|..|.:|.:|:.::.::.||.|...|.::||..:..||..|:.|....:.|..||:|
plant   369 KKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLETKRYLFLKLLKKV 433

  Fly   889 EIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRL-QVVADNGKTVM---ASL 949
            .:.|..:...|..|..||:.|.::...||.|:||..::|..:.||.| ......|:|..   ..|
plant   434 PLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDL 498

  Fly   950 KAGSYFGEI---SILNMGTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKR 1011
            .||...|::   ::.::.:.....:.:|:::...:.||:|..|:..|..:|.    ||.|..::.
plant   499 IAGDSCGDLLTWALYSLSSQFPISSRTVQALTEVEGFVISADDLKFVATQYR----RLHSKQLQH 559

  Fly  1012 LEKY 1015
            :.::
plant   560 MFRF 563

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42260	NP_001356969.1	Ion_trans	581..819	CDD:334124	60/319 (19%)
		CAP_ED	890..1004	CDD:237999	28/120 (23%)
		DUF4655	1084..>1154	CDD:317882
CNGC11	NP_182167.2	CAP_ED	437..564	CDD:237999	31/131 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1073751at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920