DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and cnga2a

DIOPT Version :10

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:NP_001038211.1 Gene:cnga2a / 751786 ZFINID:ZDB-GENE-061005-1 Length:673 Species:Danio rerio


Alignment Length:469 Identity:228/469 - (48%)
Similarity:311/469 - (66%) Gaps:8/469 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 AATAARKLHFVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLY 626
            |.|..:...|:..||..|.|.|..|::.|.|||:..::.|..|.|:..|...:|..||||||.:|
Zfish   126 AKTKKKSDVFILSPADDLYYRWLFVIASAVLYNWCFVVARACFNELQTRNFILWLFLDYLSDVIY 190

  Fly   627 LIDILFHFRTGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFN-SILRSFRLV 690
            ::|.....|||:||.|:|..|.:|||..|.::..|.:|.|.::|.|..|:.||.: ..||..||:
Zfish   191 ILDTCVRLRTGFLEQGLLVKDLIKLRESYFHTLQFKLDLLSIIPTDLGYIVIGIHVPELRLNRLM 255

  Fly   691 KIYRFWAFMDRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSE 752
            :..|.:.|.||||..|:||||||...|:.|:|||.|||.|:|..|.|:.||||..|||   .|.:
Zfish   256 RFSRLFEFFDRTETRTSYPNLFRICNLVLYILVIIHWNACIYFAISKSLGFGSDQWVYPNISDPK 320

  Fly   753 SADVVKQYLQSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAA 817
            ...:.:.|:...||.||.|||||::|.|....||:||:...|.|:::|||::|:|..::::::|.
Zfish   321 FGTLTRGYVYCLYWSTLTLTTIGEMPAPVQDEEYLFVVFDFLVGVLIFATIVGNVGAMISNMNAT 385

  Fly   818 RKEFQAKLDGVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHL 882
            |.|||.::|.:|.||:.|:|...|:.:|||||||||..:|..||:..:..||:||:|||||||||
Zfish   386 RAEFQGQIDAIKHYMKFRKVSKELEARVIKWFDYLWTNKKTIDEQDVLKNLPNKLRAEIAINVHL 450

  Fly   883 DTLKRVEIFQNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMA 947
            :|||:|.|||:.|||.|.||||:|||.:|||||||||||::||||||:..|.|.||||:|.|..|
Zfish   451 ETLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGCLAVVADDGVTQYA 515

  Fly   948 SLKAGSYFGEISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVK 1010
            .|.|||.||||||||:  ...||||||::||:||||||.|||.|:.:.:.|||.|:..||....:
Zfish   516 HLTAGSCFGEISILNIRGSKMGNRRTANIRSIGYSDLFCLSKGDLMEAVMEYPDAKKVLEEKGRQ 580

  Fly  1011 RLEKYKKAPLEKVK 1024
            .|  .|:..||:|:
Zfish   581 IL--IKEGLLEEVE 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 102/242 (42%)
CAP_ED 890..1004 CDD:237999 74/115 (64%)
cnga2aNP_001038211.1 Ion_trans 144..386 CDD:459842 101/241 (42%)
CAP_ED 458..574 CDD:237999 74/115 (64%)
CLZ 574..642 CDD:465160 7/21 (33%)

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