DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42260 and LOC100334711

DIOPT Version :10

Sequence 1:NP_001356969.1 Gene:CG42260 / 37614 FlyBaseID:FBgn0259145 Length:1269 Species:Drosophila melanogaster
Sequence 2:XP_002660423.2 Gene:LOC100334711 / 100334711 -ID:- Length:718 Species:Danio rerio


Alignment Length:458 Identity:221/458 - (48%)
Similarity:305/458 - (66%) Gaps:14/458 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   571 FVFDPAGRLCYYWSMVVSMAFLYNFWVIIYRFAFQEINRRTIAIWFCLDYLSDFLYLIDILFHFR 635
            ::.|||..|.|:|..:|::...||..:::.|..|.|:......:|..|||.||.:|.:|.....|
Zfish   190 WIMDPATDLYYHWLTIVAIPVFYNLMLLVTRACFNELQDDYTILWMVLDYTSDVIYYLDTFVRSR 254

  Fly   636 TGYLEDGVLQTDALKLRTHYMNSTIFYIDCLCLLPLDFLYLSIGFNS-ILRSFRLVKIYRFWAFM 699
            ||:||.|:|..::.||..||..|..|..|...::|.|.|.|.:|:|: .||..||.|:.|.:.:.
Zfish   255 TGFLEQGLLVRESKKLWEHYKKSPQFKFDIFSMIPTDILMLKVGYNNPELRFNRLFKMARLFEYF 319

  Fly   700 DRTERHTNYPNLFRSTALIHYLLVIFHWNGCLYHIIHKNNGFGSRNWVY---HDSESADVVKQYL 761
            ||||..||:||:||.:.|:.|:|:|.|||||::..|.|..||||.:|||   .|.|...:.::|:
Zfish   320 DRTETRTNFPNIFRISNLVLYILIIIHWNGCIFFAISKTLGFGSDSWVYPNISDPEFGRLGRKYI 384

  Fly   762 QSYYWCTLALTTIGDLPKPRSKGEYVFVILQLLFGLMLFATVLGHVANIVTSVSAARKEFQAKLD 826
            ...||.||.|||||:.|.|....||.||:...|.|:::|||::|:|..::::::|:|.|||||:|
Zfish   385 YCLYWSTLTLTTIGETPPPVRDIEYFFVVSDFLIGVLIFATIVGNVGAMISNMNASRAEFQAKID 449

  Fly   827 GVKTYMRMRRVPNHLQVKVIKWFDYLWLTQKCSDEERAVSCLPDKLKAEIAINVHLDTLKRVEIF 891
            .:|.||:.|:|...|:.:|:|||||||..||..||:..:..|||||||||||||||:||::|.||
Zfish   450 SIKQYMQFRKVSKDLEARVVKWFDYLWTEQKTCDEKEVLKYLPDKLKAEIAINVHLETLRKVRIF 514

  Fly   892 QNTEAGFLCELVLRLRPVLFSPGDYICRKGEVGKEMYIVNRGRLQVVADNGKTVMASLKAGSYFG 956
            |:.|||.|.||||:|:|.:||||||||:||::|:||||:..|:|.||||:|.|....|..|:|||
Zfish   515 QDCEAGLLVELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGAYFG 579

  Fly   957 EISILNM--GTAGNRRTASVRSVGYSDLFVLSKKDMWDVLKEYPAARVRLESIAVKRLEKYKKAP 1019
            |||||.:  ..|||||||::|||||||||.|||.|:.|.|.|||.|:        |.||:..:|.
Zfish   580 EISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMDALSEYPEAK--------KALEEKGRAI 636

  Fly  1020 LEK 1022
            |.|
Zfish   637 LMK 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42260NP_001356969.1 Ion_trans 581..820 CDD:459842 97/242 (40%)
CAP_ED 890..1004 CDD:237999 72/115 (63%)
LOC100334711XP_002660423.2 None

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