DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp58c and Obp50d

DIOPT Version :10

Sequence 1:NP_611710.1 Gene:Obp58c / 37608 FlyBaseID:FBgn0034769 Length:199 Species:Drosophila melanogaster
Sequence 2:NP_725388.2 Gene:Obp50d / 246436 FlyBaseID:FBgn0050074 Length:173 Species:Drosophila melanogaster


Alignment Length:168 Identity:37/168 - (22%)
Similarity:63/168 - (37%) Gaps:27/168 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 CCKHPDGHNDLIEGCARETNFTLPNQNEEALVDITADRAIRGT----CFGKCVFSKLNLMKDNNL 97
            |.:.||  ...:..|.:     |||.:..:.....:...:.|.    |..:|:|...|.:...:|
  Fly    22 CSQRPD--VTALRNCCK-----LPNLDFSSFNSKCSQYLVNGVHISPCSFECIFRAANALNGTHL 79

  Fly    98 DMDAVRSLFTERFPDDPEYAKEMINAFDHCHGKSEENTSMFLSKPLFKQMSKQ------FCDPKS 156
            .|:.:..:.......| |:....::.|..| |..|        |.|.|.|.::      .|...:
  Fly    80 VMENIEKMMKTILGSD-EFVHVYLDGFRSC-GNQE--------KVLIKAMKRRRVPITGKCGSMA 134

  Fly   157 SVVLACVIRQFFHNCPADRWSKTKECEDTLAFSKKCQD 194
            .:...|..|..:.|||...|||:..|.:...:|.:|.|
  Fly   135 IMYGLCAHRYVYRNCPESVWSKSATCNEAREYSIRCDD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp58cNP_611710.1 PBP_GOBP 47..135 CDD:472229 17/91 (19%)
Obp50dNP_725388.2 None

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