DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppa and AgaP_AGAP011930

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_320603.3 Gene:AgaP_AGAP011930 / 1280739 VectorBaseID:AGAP011930 Length:668 Species:Anopheles gambiae


Alignment Length:589 Identity:128/589 - (21%)
Similarity:216/589 - (36%) Gaps:193/589 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ASPESPPPVEG--THISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAY------AKSVWK-- 190
            |:|:.|.|...  |..:.|..|||.::.:.:.|.|.....|.|..|.:||:      .:.:::  
Mosquito    49 ATPKQPTPEPEIFTGFNYLPMELLLKVMKQISVDDRLACGQTCHRWMEAAHYYLPFSDRIIYRFT 113

  Fly   191 ---------GVEAKLHLKRSSP--------------------------SLFNCLVK--------- 211
                     .:::.|...|..|                          ::.|||:|         
Mosquito   114 NVNFTDYEPPIKSFLGAFRIFPRIAIKACTFYGNSQFWPLFGEHVIELTIKNCLIKDTELLYILE 178

  Fly   212 -----RGIKKVQILSLRRS---------------LKDLVLGV--------------------PAL 236
                 |.:|..|...|.||               |.|| |.|                    |.:
Mosquito   179 HVPNLRQLKIEQCDELFRSWYFEKRQSCCESHFVLPDL-LDVSLTNNDFLDELHFNKLMTLAPNI 242

  Fly   237 TSLNLSGCFN-----------------------------------VADMNLGHAFSVDLPNLKTL 266
            ..|:||.||.                                   :.|:.|.....::..:|:|.
Mosquito   243 AHLDLSNCFKMIASHRRVAMVEHIMRFINMHQFQLHTLKFNGTLAIDDICLSTLSMIEGLSLETF 307

  Fly   267 DLSLCKQ----------------ITDTSLGRIAQH-------------LRNLETLELGGCCNITN 302
            .::.|.:                ||.....::.:|             ..||..|:|.....||:
Mosquito   308 SMTFCDKIPAAIIDLLRRQPDLNITQDLEWKVGRHPIKAPGFISFLVRQTNLVHLDLTSSLGITD 372

  Fly   303 TGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEAL--G 365
            ..:.||...|.|||.|.||.|..::|:||.::...        :.||.|.|.:|.|:||.|:  |
Mosquito   373 EVMELITTCLPKLKTLKLRRCILVTDEGIMNIVNL--------VNLEVLDLSNCYRISDHAMYRG 429

  Fly   366 HIAQGLTSLKSINLSFCVSVTDSGLKHLA-RMPKLEQLNLRSCDN-ISDIGMAYLTEGGSGINSL 428
            .|.:.:.:|..:.|....:::|..|..:. ....|:.|:|.:..| .:|..|.|:......:..|
Mosquito   430 VIGRKVKNLHELYLCELPTLSDYSLIQVTLNYEMLQVLDLSNSPNAATDATMQYVNYYLVSLKQL 494

  Fly   429 DVSFCDKISDQALTHI-----------------AQGLYRLRSLSLNQC-QITDHGMLKIAKALHE 475
            .:..|.|::|..||.|                 ...|::||.|:|..| :|||.. |:.|..|.|
Mosquito   495 HLYCCTKLTDSGLTGIDLPVKPMITWDQEETFPLDRLFKLRVLNLIGCYRITDLS-LENAFKLAE 558

  Fly   476 LENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDII---MKLPKLQKLNLGLWLV 537
            |:.|::.:|.:|::||:..|::..|.|:.|||..|..::...|:::   :|..:..|:|....|.
Mosquito   559 LKELHLARCYQISEKGIAVLSQVATALEFIDLSECPLVNDNCIEMLTANLKRLRTLKVNKCPQLT 623

  Fly   538 RXCV 541
            . |:
Mosquito   624 NACL 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 11/46 (24%)
AMN1 <226..>334 CDD:187754 38/191 (20%)
leucine-rich repeat 236..256 CDD:275381 7/54 (13%)
leucine-rich repeat 263..288 CDD:275381 6/53 (11%)
leucine-rich repeat 289..314 CDD:275381 8/24 (33%)
leucine-rich repeat 315..347 CDD:275381 9/31 (29%)
AMN1 347..524 CDD:187754 56/201 (28%)
leucine-rich repeat 348..373 CDD:275381 11/26 (42%)
leucine-rich repeat 374..398 CDD:275381 4/24 (17%)
leucine-rich repeat 399..424 CDD:275381 7/25 (28%)
leucine-rich repeat 425..450 CDD:275381 8/41 (20%)
leucine-rich repeat 451..475 CDD:275381 11/24 (46%)
leucine-rich repeat 476..501 CDD:275381 7/24 (29%)
AgaP_AGAP011930XP_320603.3 F-box-like 64..>99 CDD:289689 10/34 (29%)
AMN1 275..556 CDD:187754 67/289 (23%)
leucine-rich repeat 359..384 CDD:275381 8/24 (33%)
leucine-rich repeat 385..409 CDD:275381 9/31 (29%)
leucine-rich repeat 410..437 CDD:275381 11/26 (42%)
leucine-rich repeat 438..533 CDD:275381 19/94 (20%)
leucine-rich repeat 439..463 CDD:275381 3/23 (13%)
leucine-rich repeat 464..490 CDD:275381 7/25 (28%)
AMN1 <528..668 CDD:187754 32/101 (32%)
leucine-rich repeat 534..558 CDD:275381 11/24 (46%)
leucine-rich repeat 559..584 CDD:275381 7/24 (29%)
leucine-rich repeat 585..610 CDD:275381 6/24 (25%)
leucine-rich repeat 611..635 CDD:275381 4/17 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.