DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYBP and yaf2

DIOPT Version :10

Sequence 1:NP_611705.1 Gene:RYBP / 37601 FlyBaseID:FBgn0034763 Length:150 Species:Drosophila melanogaster
Sequence 2:XP_017210591.1 Gene:yaf2 / 692296 ZFINID:ZDB-GENE-041210-115 Length:184 Species:Danio rerio


Alignment Length:148 Identity:75/148 - (50%)
Similarity:93/148 - (62%) Gaps:14/148 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KRQAK-VIEENFWDCSVCTYRNSAEAFKCRMCDVRKGTSTRKPRLNSALVAQQAATLPGASVNMP 75
            ||||| ..::.:|||||||::|:||||||.||||||||||||||..|.||:|| .|...||..:|
Zfish    13 KRQAKPSSDDGYWDCSVCTFKNTAEAFKCMMCDVRKGTSTRKPRPVSQLVSQQ-VTQQFASATLP 76

  Fly    76 NGKSASGSRHGSGHDRQ------RHKRYPARLKNVDRSTAQTREVTVNSVTVFITEY--KAKPVS 132
            . |..........::|:      .||:...||||||||:||..||||..:||.||:|  |.||.|
Zfish    77 K-KEKKEKTEKDKNEREPTLKKNNHKKMRPRLKNVDRSSAQHLEVTVGDLTVIITDYKEKTKPSS 140

  Fly   133 SRRESSEQSFSESNDSRS 150
            |   ||..:.|..:.|:|
Zfish   141 S---SSSSATSADHHSQS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYBPNP_611705.1 zf-RanBP 20..43 CDD:395516 15/22 (68%)
RanBP2-type Zn finger 23..42 CDD:275377 14/18 (78%)
YAF2_RYBP 98..130 CDD:465386 20/33 (61%)
yaf2XP_017210591.1 ZnF_RBZ 25..45 CDD:197784 15/19 (79%)
RanBP2-type Zn finger 25..44 CDD:275376 14/18 (78%)
YAF2_RYBP 104..136 CDD:465386 19/31 (61%)

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