DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4250 and si:dkeyp-75b4.8

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_001336328.1 Gene:si:dkeyp-75b4.8 / 796031 ZFINID:ZDB-GENE-090313-395 Length:182 Species:Danio rerio


Alignment Length:155 Identity:41/155 - (26%)
Similarity:65/155 - (41%) Gaps:29/155 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YENMQPQAPGFQA----PPSYD--SAPQQV-----------YPQLHQGQGV--ILQGENTENYES 52
            |:.:.|..|..:.    ||:|:  :.||.:           ||.|:|...:  :.|.:.....:|
Zfish    25 YDEIIPPPPTIKTPATPPPAYNEPNIPQGIPLNTCTGGPNPYPILNQPTQIAAVTQQQQVFVQQS 89

  Fly    53 IGNNAP---------PNVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC-CCC 107
            :...||         ...|...|:...|..|.....|.||::|...:.|:.::|..||||| ||.
Zfish    90 VNPVAPQVIVVQPQQSTTLDDTPASIVCRYCHQSIVTHVEYKPGVISWLMCVVISFLGGICGCCV 154

  Fly   108 IPYCTDSCQSAKHTCTSCGAYVGTY 132
            ||:.......|.|:|..|..::|.|
Zfish   155 IPFFVRGFLDAHHSCPLCKRHIGIY 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 24/68 (35%)
si:dkeyp-75b4.8XP_001336328.1 zf-LITAF-like 110..179 CDD:463165 23/68 (34%)

Return to query results.
Submit another query.