DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and F16F9.1

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_509434.2 Gene:F16F9.1 / 184573 WormBaseID:WBGene00017513 Length:157 Species:Caenorhabditis elegans


Alignment Length:161 Identity:41/161 - (25%)
Similarity:59/161 - (36%) Gaps:47/161 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQAPGFQAPPSYD----------------------SAPQQVY-----PQLHQGQGVILQGENTEN 49
            |::|    ||||.                      ..|:..|     |.:...|..::..|..:|
 Worm     2 PESP----PPSYSPRRPPPPYEEQNNRNAKKESTMGTPEHHYKVSPPPFVPLTQPTVIDVEQLQN 62

  Fly    50 YESIGNNAPPNVL-----GQCPSVA----TCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC- 104
            ....|....|.|:     ...||.|    ||.|||....|..:|...:.|.::.:|:.    || 
 Worm    63 VVLPGGQPNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLTWIVFILVL----ICF 123

  Fly   105 --CCCIPYCTDSCQSAKHTCTSCGAYVGTYK 133
              ...:|:|.|||:.|.|.|..|.|.:|..|
 Worm   124 FPLAFVPFCLDSCKDAHHYCPRCNALLGIKK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 25/73 (34%)
F16F9.1NP_509434.2 zf-LITAF-like 88..154 CDD:463165 22/69 (32%)

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