DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and LOC103911283

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001429857.1 Gene:LOC103911283 / 103911283 -ID:- Length:217 Species:Danio rerio


Alignment Length:154 Identity:36/154 - (23%)
Similarity:58/154 - (37%) Gaps:25/154 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NFQYENMQPQAPG---FQA---PPSYD---SAPQQVYPQLHQGQGVILQGENTENYESIGNNAPP 59
            |..|.:. |:..|   ||.   |.:|.   |..|.:|||::.....:....|:.|......:..|
Zfish    63 NMGYTSF-PEPGGNTHFQGGSNPGTYSQTTSPTQGIYPQINSPNPGMYPQVNSPNPYPQATSPNP 126

  Fly    60 NVLGQCPSVAT---------------CPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCCIP 109
            ....|..:|.|               ||.|.::..|..|........:....:.::|...||.:|
Zfish   127 GTYPQTTTVTTTVRMPSLSDLPAQTMCPHCKLQVITITEHFSGLSAWVACGCLALIGCWPCCLMP 191

  Fly   110 YCTDSCQSAKHTCTSCGAYVGTYK 133
            :..|||:..:|.|.:|...:..||
Zfish   192 FWMDSCKDVEHRCPNCNNILCYYK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 17/81 (21%)
LOC103911283NP_001429857.1 None

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