DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and Cdip1

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001345008.1 Gene:Cdip1 / 66626 MGIID:1913876 Length:229 Species:Mus musculus


Alignment Length:163 Identity:38/163 - (23%)
Similarity:53/163 - (32%) Gaps:44/163 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPPPYSDPFATAPPAEDVMQQNLASPAH---------------PNPVIPVMAQTMPVLQPVSVM- 57
            :||||.      ||.:.|.|.... |.|               |.| .|.|....|...|.... 
Mouse    71 APPPYE------PPGQPVPQPGFV-PPHMNADGTYMPAGFYPPPGP-HPPMGYYPPGPYPPGPYP 127

  Fly    58 ---HHQTTVLVDN-------TRQG---------TICPHCNARIRLRVEHHPTGSTYCMAALLCLF 103
               .|..||||.:       ..||         |:||||...|..::.:......:.:....|..
Mouse   128 GPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFM 192

  Fly   104 LC-WPCVCAPCCCNCCYKTSQYCPNCNSCLGSF 135
            .| ..|...||..|.....:..||:|.:.:.::
Mouse   193 GCDLGCCLIPCLINDFKDVTHTCPSCKAYICTY 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 17/76 (22%)
Cdip1NP_001345008.1 zf-LITAF-like 158..226 CDD:463165 15/68 (22%)

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