Protein Alignment CG42565 and Litaf

DIOPT Version :10

• Sequence 1: NP_611702.1
• Gene: CG42565 / 37598
• FlyBaseID: FBgn0260767
• Length: 135
• Species: Drosophila melanogaster
• Sequence 2: NP_001099205.1
• Gene: Litaf / 65161
• RGDID: 69294
• Length: 161
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 42/167 - (25%)
• Similarity: 58/167 - (34%)
• Gaps: 47/167 - (28%)

  Fly     7 VDSPPPYS-----DPFATAPPA-EDVMQQNLASPAHPNP-------------------------V 40
            :.:|.||.     ....||||. |:.:..|...|..|.|                         .
  Rat     1 MSAPGPYQAAAGPSVMPTAPPTYEETVGVNSYYPTPPAPQPGPATGLITGPDGKGMNPPSYYTQP 65

  Fly    41 IPV------MAQTMPVLQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAAL 99
            :||      ..||:.|.||:|        ..|...| ..||.||..|..::.::....|:.....
  Rat    66 VPVPNANAIAVQTVYVQQPIS--------FYDRPIQ-MCCPSCNKMIVTQLSYNAGALTWLSCGS 121

  Fly   100 LCLFLCWP-CVCAPCCCNCCYKTSQYCPNCNSCLGSF 135
            |||..|.. |...|.|.:.......|||||.:.||::
  Rat   122 LCLLGCVAGCCFIPFCVDALQDVDHYCPNCKALLGTY 158

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42565	NP_611702.1	zf-LITAF-like	68..135	CDD:463165	21/67 (31%)
Litaf	NP_001099205.1	PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732	20..23		2/2 (100%)
		zf-LITAF-like	89..159	CDD:463165	22/71 (31%)
		Membrane-binding amphipathic helix. /evidence=ECO:0000305	111..134		6/22 (27%)