DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and si:ch211-157c3.4

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001157840.1 Gene:si:ch211-157c3.4 / 561592 ZFINID:ZDB-GENE-030131-8454 Length:149 Species:Danio rerio


Alignment Length:148 Identity:31/148 - (20%)
Similarity:46/148 - (31%) Gaps:39/148 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIP----------VMAQTMPVLQPVSVMHHQTTV 63
            :||||:      .|.||....|:.......|..|          .:|.:.|| |..|.......|
Zfish     8 TPPPYT------IPVEDGKGSNVKVYHVHTPFTPQSSTYGASHAQVASSRPV-QSQSTEARNKYV 65

  Fly    64 LVDNTRQG-----TICPHCNARIRLRVEHHPTGSTYCMAALLCLFLCWPCVCAPCCCNCC----- 118
            ..::...|     ..|..|..::...|.:..  ..|.....:.:|.|      .....||     
Zfish    66 SYESYELGRKPAMATCTSCQQQVLTNVTYKV--GVYAWLMCILIFFC------GFVLGCCLIPFF 122

  Fly   119 ---YKTSQY-CPNCNSCL 132
               :|.:.: ||.||..|
Zfish   123 MKFFKDAYHSCPRCNKIL 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 15/79 (19%)
si:ch211-157c3.4NP_001157840.1 zf-LITAF-like 74..142 CDD:463165 14/75 (19%)

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