DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and cdip1

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001092712.1 Gene:cdip1 / 557073 ZFINID:ZDB-GENE-070720-18 Length:213 Species:Danio rerio


Alignment Length:141 Identity:36/141 - (25%)
Similarity:48/141 - (34%) Gaps:15/141 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KRVDSPPPYSDPFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLVDNTR 69
            |.:..|.|...|.....|........:...|.|.|.......|..||.|........|||.....
Zfish    74 KPMHMPMPMPHPHGGYYPPLGHFPHTMGEYAGPGPSHFAPGHTATVLAPPGAATTTVTVLQGEMF 138

  Fly    70 QG----TICPHCNARIRLRVEHHPTGSTYCMAALLCLFLCW------PCVCAPCCCNCCYKTSQY 124
            |.    |:||||...|..|:.|    ....|..|:|:| |:      .|...||..:.....:..
Zfish   139 QSAPVQTVCPHCQQPIITRISH----DIGLMNTLVCMF-CFFVGCDLGCCLIPCLIDDLKDVTHT 198

  Fly   125 CPNCNSCLGSF 135
            ||||...:.::
Zfish   199 CPNCKGYIYTY 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 21/76 (28%)
cdip1NP_001092712.1 zf-LITAF-like 142..210 CDD:463165 20/73 (27%)

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